Roseivivax marinus: LVO79_10135
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Entry
LVO79_10135 CDS
T08313
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rmh
Roseivivax marinus
Brite
KEGG Orthology (KO) [BR:
rmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rmh03032
]
LVO79_10135 (gyrA)
03400 DNA repair and recombination proteins [BR:
rmh03400
]
LVO79_10135 (gyrA)
Enzymes [BR:
rmh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LVO79_10135 (gyrA)
DNA replication proteins [BR:
rmh03032
]
Prokaryotic type
DNA Topoisomerases
LVO79_10135 (gyrA)
DNA repair and recombination proteins [BR:
rmh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LVO79_10135 (gyrA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
UMA63418
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All DBs
Position
2144481..2147252
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AA seq
923 aa
AA seq
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MSDTPEPPEFDEENGGPERPLPGGPTVSILDEMKSSYLDYAMSVIVSRAIPDLRDGLKPV
HRRILYAMHETGNTHDKSYRKSARPVGDVMGKYHPHGDSAIYDALVRMAQDFSMSLPLLD
GQGNFGSMDGDNPAAMRYTEVRMDKPAAYMLADIDKDTVDFQDNYDGKDREPTVLPARFP
NMLVNGAGGIAVGMATNIPPHNLGEVIDATLALIDEPDLSSEQLIDYIPAPDFPTGGLIL
GRSGARKAYLEGRGSVIIRAKTRIEELRKDRYAVVIDEIPYQVNKAAMIEKIAEAARDKK
IEGIAHVQDESDRSGVRVVVELKRDATPDVVLNQLYRFTPMQTSFGCNMLALNGGKPEQL
TLRKFLTSFIDFREDVVARRTAYLLRKARERSHILCGLAVAVSNVDEVVATIRASKDASE
AREALMTRRWPAEEIAPYIRLIDDPTHTMNDDGTYNLSEAQARAILELRLQRLTQLGVQE
VTDELEELAGKIKDYLEILGSRERIMSIISDELKEVRELFAVPRRTEIADWAGDMDDEDL
IEREDMVVTVTQSGYIKRTPLSDFRSQRRGGKGVSGGGLKDDDAVTTLFVANTHTQLLFF
TTDGMAYKLKTWRLPAGGRTSKGKAIVNILPIPTGVSIAAIMPVDRDEADWDDLQIVFAT
SAGDVRRNALSDFTNVKRNGKIAMELAEGTSLVNARIASEDDDVMLVTEGGRAIRFPTTD
VRVFKGRKSTGVRGVRLSGNDRVVSMSIIRHFEATPEERAAYLKMRRAVAGLADEDTETD
DDDAAPGLITQERYAEMSAAENLILTVTAQGSGKLSSSHDYPVRGRGGQGVTAMDKAMRG
GPLVASFPVETDDQIMLATSRGQSIRVPIEGISFRSRTAGGVRIFNTGAGETVVSVAWIA
EQPEAEIDAEGGADDAAEPSGDS
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatacgcccgaaccccctgagttcgatgaagaaaacggcggccccgagcgtccc
ctgccgggcggccccacggtttcgatcctcgacgagatgaaatcgtcctatctcgattac
gcgatgagcgtgatcgtgagccgggcgattcccgacctgcgcgacggcctcaaaccggtg
caccgccgcatcctctacgcgatgcacgagaccggaaacacgcacgacaagtcctaccgc
aagtccgcgcgccccgtgggcgacgtgatgggtaagtaccacccccacggcgacagcgcg
atctacgacgcacttgtgcggatggcgcaggacttctcgatgtcgctgccgcttctggac
ggtcagggcaacttcggctccatggacggggacaaccccgcggccatgcgttacaccgag
gtccgcatggacaagccggcggcttacatgctggcggacatcgacaaggacaccgtcgat
tttcaggacaactacgacggcaaggaccgcgaaccaacggtcctgccggcgcgcttcccg
aacatgctggtcaacggcgcgggcggcatcgcagtgggcatggccaccaacatcccgccg
cacaacctcggcgaagtgatcgacgcgacgcttgccctgatcgacgagcccgacctgtcg
tcggagcagctgatcgactacatcccggccccggacttccccacaggcggcctgatcctc
ggccggtctggcgcgcggaaggcctatctcgagggccgcggcagcgtcatcatccgtgcc
aagacgcggatcgaggaactgcgcaaggaccgttacgccgtcgtcatcgacgagatcccc
taccaggtgaacaaggccgcgatgatcgagaagatcgccgaggccgcacgcgacaagaag
atcgagggcatcgcccacgtccaggacgagagcgaccgctccggcgtccgcgtggtggtc
gaactcaagcgagacgcgaccccggacgtggtgctgaaccagctgtaccgcttcacgccg
atgcagacgtccttcggctgcaacatgctggcgctcaacggcggcaagcccgaacagctg
actttgcgcaagttcctgacgtcgttcatcgacttccgcgaggacgtggtcgcccggcgt
accgcctacctgctgcggaaggcgcgcgagcgcagccacatcctctgcggtctggcggtc
gcggtatcgaacgtggacgaggtcgtggccaccatccgcgcctccaaggacgcctccgag
gcgcgcgaggcactgatgacacgccgctggcccgccgaggagatcgcgccctacatccgg
ctgatcgacgacccgacgcacaccatgaacgacgacggaacctacaacctgtccgaggca
caggcccgcgccattctcgagctgcgcctccagcgcctgacgcaactcggcgtgcaggag
gtcaccgacgagctcgaggaactggccggcaagatcaaggactacctcgagatcctcggc
tcgcgcgagcggatcatgtcgatcatctcggacgaattgaaagaggtgcgcgagctgttc
gccgttccccgccggaccgaaatcgccgactgggccggcgacatggacgacgaggacctg
atcgagcgcgaggacatggtcgtgaccgtcacccagtccggctacatcaagcgcacgccg
ctgtcggacttccgcagccagcggcgcggcggcaagggcgtctcgggcggcgggctcaag
gacgacgacgcggtgacgacgttgttcgtggcgaacacgcacacgcagctcctgttcttc
accacggacgggatggcctacaagctcaagacctggcgcctgcccgcgggcggccgcacg
tccaagggcaaggccatcgtcaacatcctgccgatccccacgggcgtctcgatcgcggcg
atcatgcccgtggatcgcgacgaagcggattgggacgacctgcagatcgtcttcgccacc
tcagcgggcgacgttcggcgcaatgcgctgtccgatttcaccaacgtgaagcggaacggc
aagatcgcgatggagctcgccgagggcaccagcctcgtgaacgcgcgtatcgcgtccgag
gatgacgacgtcatgttggtgaccgagggcggccgcgcgatccgcttccccaccaccgac
gtgcgggtcttcaagggccgcaagtccaccggcgtgcgcggcgttcgcctgtcgggcaac
gaccgcgtggtctcgatgtcgatcatccgccacttcgaggcgacgccggaagaacgcgcg
gcctatctcaagatgcgccgcgccgtggccgggcttgcggacgaggacaccgagacggac
gacgacgacgcggcccccggcctgatcacgcaggaacgctatgcggagatgtctgcggcc
gagaacctgatcctgaccgtgacagcgcagggctcgggcaagctgtcgtcgagccacgac
tacccggtgcgcgggcgtggcggccagggcgttacggcgatggacaaggccatgcggggc
ggcccgctggtggcgtccttcccggtcgagaccgacgaccagatcatgctcgcaacctcg
cgggggcagtcgatccgggtgccgatcgagggcatcagcttccgttcgcgcactgcgggc
ggggtgcggatcttcaacactggcgccggtgagacggtggtcagcgtggcatggatcgcg
gaacagcccgaagccgagatcgatgcagaaggtggcgcggacgacgcggcggaaccttcc
ggagactcctga
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