Roseivivax marinus: LVO79_14475
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Entry
LVO79_14475 CDS
T08313
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rmh
Roseivivax marinus
Pathway
rmh00061
Fatty acid biosynthesis
rmh00071
Fatty acid degradation
rmh01100
Metabolic pathways
rmh01212
Fatty acid metabolism
rmh02024
Quorum sensing
rmh04146
Peroxisome
Module
rmh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rmh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LVO79_14475
00071 Fatty acid degradation
LVO79_14475
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LVO79_14475
09145 Cellular community - prokaryotes
02024 Quorum sensing
LVO79_14475
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rmh01004
]
LVO79_14475
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rmh04147
]
LVO79_14475
Enzymes [BR:
rmh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LVO79_14475
Lipid biosynthesis proteins [BR:
rmh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LVO79_14475
Exosome [BR:
rmh04147
]
Exosomal proteins
Exosomal proteins of breast milk
LVO79_14475
Exosomal proteins of breast cancer cells
LVO79_14475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
UMA64210
LinkDB
All DBs
Position
complement(3055332..3057308)
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AA seq
658 aa
AA seq
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MATTPQGAEHPRSVPALLARNAARFGAQAAYREKEFGIWQSWTWAEAQEEIEALALGLLD
LGAQPGDFIAVIGRNRPYLYWSMVAAQMVGAVPVPLYQDAVAEEMAYVLDHCGARFVVAA
DQEQVDKVIEVADRLPSFERIIYVDSRGLRKYDHGRLSAFDAVQKAGREAGETQREELEN
RRARLDYDDICVMLYTSGTTGKPKGVVLSNRNIIETAKNSAEFDHLRANDEVLAYLPMAW
VGDFIFSIGQAYWTGFCVNCPESADTLVTDLREIAPTYYFAPPRVFETNLTQIMIRMEDA
GALKRRMFHHFMEHARRVGPRLLDGHSVGLWDRLKYRMGEVLVYGPLKNALGFSRIRVGY
TAGEAIGPEIFDFYRALGINLKQLYGQTEASVFITQQPDGEVRSDTVGVPSPGVELKIAE
SGEVFYRSPGTFVEYYKNAESTRDTKDPEGWVATGDAGFVEEDKGHLRIIDRAKDVGHMA
SGALFAPKYVENKLKFYPAILEAVVFGAGRETCCAFINIDLTAVGNWAERNNIAYSSYQE
LAGHPLVLETIQSHVEETNESVAQDEMLSGCQVHRFLVLHKELDADDGELTRTRKVRRKI
IAEKYADLVTALYDGSDEVYTETEVTYEDGRTGRIRATLAIRDAKTVPVSAPVREAAE
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
gtggcaactacgccgcagggcgcggagcatccgcgctccgtacctgcattgctggctcgc
aacgccgcgcgcttcggcgcgcaggcggcctatcgcgagaaagaattcggcatctggcaa
agctggacctgggccgaggcgcaggaagagatcgaggcgctggcactcggtctgctcgat
ctcggcgctcagccgggcgatttcatcgcggtgatcgggcgcaacaggccctacctctac
tggtccatggttgcggcgcagatggtcggagcagtgccggtgccgctctaccaagatgcc
gtggccgaagagatggcatacgttctcgaccactgcggcgcgcgcttcgtggtcgccgcc
gatcaggaacaggtcgacaaggtgatcgaagtcgccgaccggctgccgtcgttcgagcgc
atcatctacgtcgactcacggggcttgcggaaatacgaccacggccgcctgagcgccttc
gacgcggtgcagaaggccgggcgcgaggcaggtgagacgcagcgcgaagagttggagaac
cggcgcgcccggctcgactacgacgatatctgcgtgatgctctacacctcgggcaccacc
ggaaagcccaagggcgtcgtgctgtccaaccgcaacatcatcgagacggcgaaaaactcg
gccgagttcgatcatctgcgcgcaaacgacgaggtcttggcctatctgccgatggcctgg
gtgggcgatttcatcttctcgatcgggcaagcctactggacggggttctgcgtgaactgc
ccggaaagcgccgacacgctggtcacggacctgcgtgaaatcgcccccacctactacttc
gcgccgccgcgcgtcttcgagaccaacctcacccagatcatgatccggatggaagacgcg
ggcgccctcaagcggcgcatgttccaccacttcatggagcacgcccgtcgcgtggggccg
cgccttctcgacggacattccgttgggctttgggaccggctgaaataccgcatgggcgag
gtgctggtctacggtccgctcaagaacgcgctgggcttcagtcggatccgggtgggctac
acggcgggcgaggccatcgggccggagatcttcgacttctaccgcgcgctcggcatcaat
ctgaagcagctctacggccagaccgaagcgtccgtgttcatcacccagcagcccgacgga
gaggtgcgctcggacaccgtgggcgtgccgtcgccgggggtggagctgaagatcgcggag
tcgggggaggtgttctaccgctctccgggcaccttcgtggaatactacaagaacgccgag
tcgacccgggacaccaaggatcccgagggctgggtcgcgaccggcgatgcgggttttgtc
gaggaggacaagggccacctgcggatcatcgaccgcgcgaaggatgtggggcacatggcc
tcgggcgccctgttcgcgccgaaatacgttgagaacaagctcaagttctaccccgcgatc
ctcgaggcggtggtgttcggcgcgggccgcgagacgtgttgcgccttcatcaacatcgac
ctcaccgcggtgggcaactgggccgagcgcaacaacatcgcctactcgtcctaccaggag
cttgccgggcatccgttggtgctggaaacgatccagtcccacgtcgaggagaccaacgag
agcgtcgcgcaggacgagatgctgtcgggctgtcaggtgcatcgcttcctggtgctgcac
aaggagttggacgccgacgacggcgagctgacgcgcacccgcaaggtgcggcgcaagatc
atcgccgagaaatacgcggatctcgtgaccgcgctctacgacgggtcggacgaggtctac
accgagaccgaggtgacctacgaggacggccgcacgggccggatacgcgcgacgctcgcg
atccgcgacgcaaagacggtgccggtgtccgcgccggtcagggaggctgcggaatga
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