Roseivivax marinus: LVO79_14880
Help
Entry
LVO79_14880 CDS
T08313
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rmh
Roseivivax marinus
Brite
KEGG Orthology (KO) [BR:
rmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rmh03032
]
LVO79_14880
03400 DNA repair and recombination proteins [BR:
rmh03400
]
LVO79_14880
Enzymes [BR:
rmh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LVO79_14880
DNA replication proteins [BR:
rmh03032
]
Prokaryotic type
DNA Topoisomerases
LVO79_14880
DNA repair and recombination proteins [BR:
rmh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LVO79_14880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Top1B_N_bact
Topoisom_I
DUF6285
Motif
Other DBs
NCBI-ProteinID:
UMA64285
LinkDB
All DBs
Position
3140856..3141848
Genome browser
AA seq
330 aa
AA seq
DB search
MKAVPDLIYYPDDRPGIRREKRGRGWSYFAPDGTRIEDRAERKRLNALAVPPAYEDVWIC
PEPLGHLQATGRDARARKQYRYHPDWTAYRARRKFDHLAAFGAALPGLRRRIQHDLREGE
AGEQSFAIAAVLALIDRAHLRVGNPDYARENETYGATTLRPRHLDLHEGGLRLTYAAKGG
QRVAKTLRDRTLHRTLAQLDDLPGPTLVSWIDEDGTSRAVTSGEVNAFLSGQIGTDGMTA
KTFRTWSGSVAALEVALSEERPTIKAMSEAAADRLHNTPTISRNSYIHPDVIDFAEEPAD
IRQKLLDDADDTRGLRQAEAALLHLLQPTT
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcggtgcccgacctgatctactaccccgacgaccgaccgggcatccggcgcgag
aagcgcggccgcggctggtcctacttcgcacccgacggcacccggatcgaggatcgcgcc
gagcgcaagcggctgaacgcgctggccgtgccgccggcctacgaggacgtctggatctgc
cccgaaccactcggccacctgcaggcgacgggccgggacgcgcgggcgcgcaagcagtac
cgctaccaccccgactggaccgcctaccgggcccgccgcaagttcgatcacctcgcggcg
ttcggcgcggccctgcccggcctgcgccgccgtatccagcacgacctgcgcgagggcgag
gcgggcgagcagtccttcgcaatcgccgccgtccttgcgctgatcgaccgcgcgcacctg
cgggtgggcaaccccgactacgcccgcgagaacgagacctacggcgccaccacgctgcgc
ccacgccacctcgacctgcatgaaggaggacttcgcctgacctacgcggccaagggcggc
cagcgcgtcgccaagaccctgcgcgaccgcaccctgcaccgcacgctggcacagctcgac
gacctgccgggcccgacgctggtgtcgtggatcgacgaggacggcacctcgcgcgcggtc
acgtcgggagaggtcaacgccttcctctcgggccagatcggcaccgatgggatgacggcc
aagaccttccgcacgtggtccggcagcgtcgcggccctggaggtggcactgtccgaggag
aggccgacgatcaaggcgatgtccgaggccgcggccgaccggttgcacaacacgccgacg
atctcgcgcaactcgtacatccatccggacgtgatcgactttgccgaagagcccgcggat
atccggcagaagctgctggatgacgccgacgacacccgtggcctgcggcaggccgaggcg
gcgctgttgcatctccttcagccaacgacctga
DBGET
integrated database retrieval system
