Roseivivax marinus: LVO79_17260
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Entry
LVO79_17260 CDS
T08313
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
rmh
Roseivivax marinus
Pathway
rmh00521
Streptomycin biosynthesis
rmh00523
Polyketide sugar unit biosynthesis
rmh00525
Acarbose and validamycin biosynthesis
rmh00541
Biosynthesis of various nucleotide sugars
rmh01100
Metabolic pathways
rmh01110
Biosynthesis of secondary metabolites
rmh01250
Biosynthesis of nucleotide sugars
Module
rmh_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
rmh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LVO79_17260 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LVO79_17260 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
LVO79_17260 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LVO79_17260 (rfbB)
00525 Acarbose and validamycin biosynthesis
LVO79_17260 (rfbB)
Enzymes [BR:
rmh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LVO79_17260 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
adh_short
adh_short_C2
NmrA
Sacchrp_dh_NADP
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
UMA64726
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Position
complement(3659153..3660205)
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AA seq
350 aa
AA seq
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MKLLVTGGAGFIGSAVVRQAIRDGHEVVNVDALTYAACLDNVAEVAEAPGYAFEQADIRD
RAALDRIFAAHAPDAVMHLAAESHVDRSIDGPGTFIETNVMGTFHLLEAARAYWQEKGRP
ESFRFHHISTDEVYGSLGPNPETDGQFTEDTPYDPRSPYSASKASSDHLVRAWHETYGLP
VVLTNCSNNYGPFHFPEKLVPVVILRALAGAPIPVYGKGENVRDWLYVEDHADALLTVVQ
RGEIGRSYNIGGENEAQNIELVRTICAILDEKRPGNAAYAEQITFVDDRPGHDLRYAIDP
TRISEELGWRPSVTLEQGLEKTVQWYLDNEDWWRALQDREGVGQRLGKAG
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgctcgtgaccggcggcgccggattcatcggctcggcggtcgtgcgccaggcc
attcgcgacggccacgaggtcgtcaacgtcgacgcgctgacctatgccgcgtgcctcgac
aacgtggccgaggtcgccgaggcgcccggctatgccttcgaacaggccgacatccgcgac
cgtgccgcgctcgaccgcatcttcgccgcgcacgcgcccgacgcggtgatgcaccttgcc
gccgaaagccacgtggaccgctccatcgacgggccgggcacgttcatcgagaccaacgtc
atgggcaccttccacctgctcgaggccgcgcgcgcctactggcaggagaagggccgcccc
gaaagcttccgctttcatcacatctccaccgacgaggtctacggctcgctcggcccgaat
cccgagaccgacggtcagttcaccgaggacacgccctacgatccgcgctcgccctactcg
gcgtccaaggcgtcgtccgatcacctcgtccgtgcgtggcacgagacctacggcctgccg
gtggtgctgaccaactgctcgaacaattacggcccgttccacttccccgagaagctggtg
ccggtggtgatcctgcgcgccctcgccggcgcgccgatcccggtctacggcaagggcgag
aacgtccgcgactggctctatgtggaggatcacgccgacgcgctgctgaccgtggtgcag
aggggcgagatcggccgcagctacaacatcggcggtgagaacgaggcccagaatatcgag
ctggtgcgcaccatctgcgccattctcgacgagaagcggcccggcaacgccgcctatgcc
gaacagatcacctttgtcgacgaccgccccggccacgacctgcgctacgccatcgatccg
acccgtatcagcgaagagctgggatggcgtccgtccgtgacgctcgagcaggggctggag
aagaccgtgcaatggtatctcgacaacgaggactggtggcgcgcgcttcaggatcgcgag
ggcgtgggccagcgtctcggcaaggcgggctga
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