Rickettsia massiliae AZT80: RMB_01370
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Entry
RMB_01370 CDS
T01758
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
rmi
Rickettsia massiliae AZT80
Pathway
rmi03030
DNA replication
rmi03430
Mismatch repair
rmi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RMB_01370 (holA)
03430 Mismatch repair
RMB_01370 (holA)
03440 Homologous recombination
RMB_01370 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rmi03032
]
RMB_01370 (holA)
03400 DNA repair and recombination proteins [BR:
rmi03400
]
RMB_01370 (holA)
Enzymes [BR:
rmi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RMB_01370 (holA)
DNA replication proteins [BR:
rmi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RMB_01370 (holA)
DNA repair and recombination proteins [BR:
rmi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RMB_01370 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPOC_AIPP2
Motif
Other DBs
NCBI-ProteinID:
AFB31188
UniProt:
H6QL33
LinkDB
All DBs
Position
252656..253630
Genome browser
AA seq
324 aa
AA seq
DB search
MKFYFSQIGRLFELITSGKIRALLLYGPDKSYIEKICKHLVKSLNMLQTSIEYADLNISS
LEILLNSSNFFGQKELIKIRSVGNSIDKNLKTILSSDYINFPVFIGEEMTSSGSIRKFFE
TEEYLAAVACYHDDEAKIERIILGKVEKTNKVISKEAITYLKAHLKGDHDLICSEINKLI
YFVHDAREITLNDVLEVISSEITANGSDLAMYFSKKDYSNFLQELDILKKQNINEVLIIR
ALIRHYLNLYIVLSKVKNGERLELAIKSLSPPIFYQYINDFMKIANGLSLTECLKTLKVL
QQAEVDYKLNPASFDLFQSILQSK
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaaattttatttttcacaaataggtagattatttgaactaataacatctggaaagatt
agagctcttttactatatggtcctgataaaagttatatagaaaaaatttgtaagcattta
gtaaaaagcttaaatatgctacaaacttctatagaatacgcagatcttaatatttcatct
ttagaaatattacttaattcgtctaatttttttggtcaaaaagaattaattaaaattaga
tcggttgggaattcaatcgataagaatttaaaaacaattctaagcagtgattatataaat
tttcctgtatttataggtgaagaaatgacttctagtgggagcattagaaagttttttgaa
accgaagaatatttagcggcagttgcttgttatcatgacgatgaagcaaaaattgaacga
attattttaggtaaagtagaaaaaactaataaagttataagtaaagaagctatcacttat
ttaaaagctcatttaaaaggtgatcatgatttaatttgtagcgaaataaataaattaata
tattttgttcacgacgcacgcgaaattactttaaacgacgttctagaagttataagtagc
gaaattacggcaaacggcagtgatttagcaatgtatttttcaaaaaaagattatagtaat
tttctgcaagagcttgatatattaaaaaaacaaaatatcaatgaagttttaattattaga
gcattaataaggcattatttaaatttatatatagttttgtcgaaagtaaaaaacggtgag
cgtttggaactcgcaataaaatcattatcaccaccgattttctatcagtatattaatgat
tttatgaagatagcaaacggtcttagcctcactgaatgtctaaagactttaaaagtgcta
caacaggcagaagtggattataagttaaatcctgctagtttcgatttattccaaagtata
ctccaaagtaaatga
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