Rickettsia massiliae AZT80: RMB_02170
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Entry
RMB_02170 CDS
T01758
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rmi
Rickettsia massiliae AZT80
Pathway
rmi00260
Glycine, serine and threonine metabolism
rmi00460
Cyanoamino acid metabolism
rmi00630
Glyoxylate and dicarboxylate metabolism
rmi00670
One carbon pool by folate
rmi00680
Methane metabolism
rmi01100
Metabolic pathways
rmi01110
Biosynthesis of secondary metabolites
rmi01120
Microbial metabolism in diverse environments
rmi01200
Carbon metabolism
rmi01230
Biosynthesis of amino acids
rmi01240
Biosynthesis of cofactors
rmi04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rmi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RMB_02170 (glyA)
09102 Energy metabolism
00680 Methane metabolism
RMB_02170 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RMB_02170 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RMB_02170 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RMB_02170 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RMB_02170 (glyA)
Enzymes [BR:
rmi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RMB_02170 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
DUF5770
WD40_Prp19
DUF1815
Motif
Other DBs
NCBI-ProteinID:
AFB31325
UniProt:
H6QI25
LinkDB
All DBs
Position
403991..405253
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AA seq
420 aa
AA seq
DB search
MNIFNKNLHETDKEINEIIKHEKLRQSSVIELIASENFVSPAVLEAQGSLLTNKYAEGYP
SKRFYNGCEEVDKAENLAIERVKKLFNCKYANVQPHSGSQANQAVYLALLQPGDTVLGMS
LDSGGHLTHGAAPNMSGKWFNVVSYSVNKETYLIDYDEIERLADLHKPKLLIAGFSAYPR
NIDFAKFREIVDKVGAYFMADIAHIAGLVAAGEHQSPIPYAHAVTSTTHKTLRGPRGGLI
LSNDEEIGQKINSALFPGLQGGPLMHIIAAKAVAFLENLQPEYKSYIQQVISNAKALASS
LQERGYDILTGGTDNHIVLVDLRKDGITGKFAANSLDRAGITCNKNAIPFDETSPFITSG
IRLGTPACTTRGFKEKDFVLVGYMVADILDGLKNNEDNSDLEQKVLNEVTKLIKLFPFYG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaatatttttaataaaaatttacatgaaacggataaagagattaatgaaataataaag
catgaaaagctacgtcaaagtagcgtaatcgagcttattgcatcagaaaatttcgtaagt
cctgctgtgcttgaagctcaagggtcgcttctgactaacaaatatgccgaaggataccca
agtaagcgattctataatggttgcgaggaagtagataaagctgaaaatttagctatagaa
cgagtaaaaaaactctttaactgcaaatatgcaaatgtccaacctcattcaggatcacaa
gcaaatcaggctgtatatcttgctttattacagccgggtgatacggttcttggtatgtct
ttagatagcggcgggcatctaacgcacggtgcagctcctaatatgtccggtaaatggttt
aacgtcgtttcttatagtgtaaataaagagacttatttaatcgattatgatgagattgaa
cgcttagcggatttgcataaaccaaaattacttatagccggtttttctgcttatcctcgt
aatattgattttgcaaaatttagagaaatcgtggataaagtaggagcttactttatggca
gatattgctcatattgcaggacttgttgccgcaggtgagcatcaaagccctattccttac
gctcacgctgttacctctactactcataaaacacttagaggtccaagaggcggtttaatt
ttatctaacgatgaagagataggtcaaaaaataaattctgcattatttccaggactacaa
ggtggtccgttaatgcatataatcgccgcaaaagccgtagcttttttagaaaatttgcag
cctgaatataaaagttatattcagcaggtaataagtaacgctaaagctttagcaagtagc
ttgcaagaaagaggatatgatatattaacaggtggtaccgataatcatattgttttagtg
gatttgcgtaaagacggaatcacgggtaagtttgccgcaaattctttggatagagcaggg
attacgtgtaataagaatgctatcccgtttgatgaaacttcgccttttatcacttcaggt
attcgccttggtactcccgcatgtactactagaggctttaaagaaaaggattttgtatta
gttggttatatggtagcagatattttagacggcttaaaaaataatgaagataatagcgat
cttgagcagaaagtattaaatgaagtgacaaaattaattaaattatttccgttttatggc
taa
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