Rickettsia massiliae AZT80: RMB_02815
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Entry
RMB_02815 CDS
T01758
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
rmi
Rickettsia massiliae AZT80
Pathway
rmi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RMB_02815 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmi03400
]
RMB_02815 (xseA)
Enzymes [BR:
rmi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
RMB_02815 (xseA)
DNA repair and recombination proteins [BR:
rmi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
RMB_02815 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Adenyl_cycl_N
Motif
Other DBs
NCBI-ProteinID:
AFB31407
UniProt:
H6QIA7
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All DBs
Position
complement(500355..501689)
Genome browser
AA seq
444 aa
AA seq
DB search
MLDNFIAHQATKEFSVSEISNKIKELLENNFGYIKVKGEISGLKVASSGHAYFNLKENTA
ILTCTCWRPILAKIKFPLNDGMEVVISGKLSSYAGNSRYQLSVDNLQPTGLGAMLQILNE
RKARLEKEGLFNKIRIPIPFLPDKIGVITSITGAVIKDIIHRIRERFPTRIIIWPVSVQG
ENSGNEIAGAIEGFNNLEEVNKPRVIIVARGGGSIEDLWSFNDEILVRAAYNSKIPIISA
VGHEVDYTLIDLAADKRAPTPTAAAEFAVPVRSIVNNTLQSYEKILLNNTSRLIKYHEQN
IVNYDKIHRYLSHYINNRQQLLDETGFNLLDALPCFIELQDTKIKSFSKERVNPAKIINY
KTLELTHQTAYLSKSANNTLKNFEYKLELNSTLLASLDYHNVLKRGFAIVKGETGNFLSS
KITAANEKIFNIKFSDGEIKVVRD
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgctagacaatttcattgcgcatcaagcaaccaaagagttttcagttagtgaaatttct
aataaaatcaaagagctattagaaaataattttggctatattaaggtaaaaggcgaaatt
tcaggcttaaaagtagcaagctcaggtcatgcttattttaacttaaaagaaaataccgcc
attttaacctgtacttgctggcgtcctattcttgctaaaatcaaatttcctttaaatgac
ggcatggaagtagtaattagcggtaaactctcaagttatgcaggtaattcacgttatcaa
ttatcggtagataatttgcaacccacaggacttggagctatgctgcaaattctaaatgag
cgtaaagccaggctcgagaaagaaggcttatttaataaaatacgtattcctatacccttt
ttacctgataaaataggcgttatcacttcaataaccggtgctgttattaaagatattatt
catcgtattcgcgaacgttttccgactcggataataatatggccggttagcgtacaaggc
gaaaattccggcaatgaaattgctggagcaattgaaggatttaacaatttagaagaggta
aataaaccacgtgttataatcgttgctagaggtggcggttctatagaagatctttggtca
tttaacgatgagatattagtacgtgctgcttataactcaaaaattcctattatttccgca
gtaggtcatgaagtggattatactttaatagatttagcagccgataaaagagctccaaca
ccaactgctgccgcagaatttgccgtaccggtacgatctattgtaaataatacgctacaa
tcttatgaaaaaatattattgaataatactagccggttaattaaatatcacgaacaaaat
atagtaaattacgataaaatacacagatatctctctcactatataaataataggcagcaa
ttactggacgaaaccggttttaatttactagatgctttaccgtgctttattgaactacaa
gacacaaagattaaatctttttctaaagaaagagtaaaccctgctaaaataatcaattac
aaaacattagaattaacacatcaaacagcttatctatcaaaatcggcaaataatactttg
aaaaactttgagtataaattagaattaaatagtacgttacttgcaagccttgattatcac
aacgtattaaaacgaggttttgctatagttaaaggagaaacgggtaattttttatcttct
aaaattactgctgcgaatgaaaaaatttttaatattaaattttctgacggtgaaatcaaa
gtagtgcgtgattag
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