Rickettsia massiliae AZT80: RMB_03550
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Entry
RMB_03550 CDS
T01758
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rmi
Rickettsia massiliae AZT80
Brite
KEGG Orthology (KO) [BR:
rmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rmi03032
]
RMB_03550 (gyrB)
03400 DNA repair and recombination proteins [BR:
rmi03400
]
RMB_03550 (gyrB)
Enzymes [BR:
rmi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RMB_03550 (gyrB)
DNA replication proteins [BR:
rmi03032
]
Prokaryotic type
DNA Topoisomerases
RMB_03550 (gyrB)
DNA repair and recombination proteins [BR:
rmi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RMB_03550 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
GyrB_insert
TPR_26
Motif
Other DBs
NCBI-ProteinID:
AFB31534
UniProt:
H6QIN4
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All DBs
Position
623536..625959
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AA seq
807 aa
AA seq
DB search
MSEIEEKFNESSYGADSIKVLKGLEAVRKRPGMYIGDVGDGSGLHHMIYEVVDNAIDESL
AGYCNLVRVTLNKNGSVTVSDNGRGIPVEIHEEEGISAAEVIMTQLHAGGKFDQNAYKVA
GGLHGVGVSVVNALSEWLELRIWRNNKEYLIRFNNGITEAPLAVVKENIDKKGTEVTFFP
SVETFTNIEFDFGTIEHRLRELAFLNSGVKILLVDNRFEEVKKVEFYYTGGIEAYVKYID
RAKHAIHPCIVVNTENVESGMSFEFAMHWNDSYHENILCFTNNIRQRDGGTHLSAFKSAI
TRVITSYLDTTGLNKKAKNDFSGEDTREGLCCVLSVKVPDPKFSSQTKDKLVSSEVRPVV
ENAVYTKVLEWFEEHPAEAKAIIAKIMEAANAREAARKARELTRRKSALEVSNLPGKLAD
CHAKDPAISELFIVEGDSAGGTAKQGRDSKIQAILPLRGKILNVERARFDKMLGSDQIGT
LITALGISVEREFSLEKLRYHKVIIMTDADVDGSHIRTLLLTFFYRHMPELINKGYLYIA
QPPLYKVKKGAAELYLKNEQALQDYLIKSTINDTTLILDCKEQLVGDNLEELINKVVKFN
GLLDHASKKFNRSITEILAINDLLNNKIFEPESDLRLKKALDVLNSLEDSPDKTNWEVLK
HENKIEFFRFSRGLKESKILLKEQLESFEFVQISKLALTIFDIFSKQLKLIVKSQEFDIL
TPSQLLNTIVECGKRGINIQRFKGLGEMNSDQLWETTLDPTKRTLLQVRVAEIDEAEGIF
STLMGDVVEPRRLFIQANALNVVNLDV
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaattgaagaaaaatttaacgaatcatcatacggtgctgattccataaaggtt
ttaaaaggtcttgaagccgtaagaaaaagaccgggaatgtatatcggggatgttggagac
gggtcgggtctacatcatatgatttatgaagtagtcgacaacgctatcgacgagtcgctt
gccggttattgcaatctagtacgagtaacattaaataaaaacggttcagtaaccgtatcc
gataacgggcgaggtatacccgttgaaattcatgaagaagaaggaatatcggcagctgaa
gttattatgacgcaacttcacgccggcggtaagtttgaccagaacgcttataaggttgca
ggcggtctacacggtgtcggtgtatcggttgtaaatgctctttctgaatggcttgagctg
cgtatttggcgtaataataaggaatatttgattagatttaataacggtataacggaagct
ccgcttgcggttgtcaaagaaaatattgataaaaaaggtacggaagttacttttttcccg
tctgtagaaacgtttactaatatagaatttgatttcggcactatagagcatcgtcttcgt
gagcttgcttttttaaattcaggcgtaaagattttactcgtcgataatcgctttgaagaa
gttaaaaaagtagagttttattatacgggcggtatagaagcttatgtaaaatatatagac
agagcgaagcacgctatccatccatgtatagtagttaatacggagaatgttgagtccggt
atgagctttgagtttgcgatgcattggaacgattcttatcatgaaaatattttatgcttt
actaataatattaggcagcgtgatggcggaactcatcttagtgctttcaaatcagcgata
acacgtgttattacctcgtatcttgatactacgggtcttaataaaaaagctaaaaatgac
tttagcggtgaagatactagggaagggctatgttgtgtgctttccgttaaagttcctgat
cctaaattttcttctcaaacaaaagataagctagtaagctccgaagtacgaccggttgtt
gagaatgccgtttatacaaaggttcttgagtggtttgaagagcatccagcagaagctaag
gcaattatagctaagattatggaagctgcgaatgctcgtgaagctgctagaaaagcaagg
gaacttactcgaagaaaatcagctttagaagtctcgaatttaccaggtaaacttgcagat
tgccatgcaaaagatcctgctatttcagaattgtttattgttgagggggactctgcgggc
ggtactgcaaagcagggtagggatagcaaaattcaggctatattgcctttgcgtggtaaa
attttgaacgttgaacgtgcaagatttgataaaatgctcggttcggaccaaatcggtacg
ttaattacagctcttggaattagtgttgaacgagaattttccttagaaaagcttagatac
cataaagttattattatgaccgatgctgatgttgacggctcgcacattagaactttatta
ctcacgtttttctatcgtcatatgcctgagctaataaataaaggctatctatatatagct
cagccaccgctttataaagtaaagaaaggagcagccgagctttatttaaagaatgagcaa
gcgctgcaagattatttgatcaaatcaactattaatgatacaaccttaattctagattgt
aaagagcagttagtgggtgataatttagaagagctaattaataaagtagttaagtttaac
ggcttgcttgaccatgctagcaaaaaatttaatcgctcaattaccgaaattcttgcgatt
aatgacttacttaataacaaaatatttgagcctgaaagtgatttaagacttaaaaaagct
ttagatgttttaaatagcttagaagattcgcctgataagactaattgggaagttttaaaa
catgaaaataaaatagagttcttccgctttagtaggggtttaaaagaaagtaaaatatta
ttgaaagagcagttagaatcatttgagtttgtacaaatatcaaagcttgctttaacgatt
tttgatatatttagtaagcaattaaagcttatagtgaaaagtcaggaattcgatatttta
acaccgagtcagttgttaaataccattgtagaatgcggaaaaagaggtataaatattcag
cgttttaagggtcttggtgagatgaattccgaccagctatgggaaactactcttgatcct
acaaaaagaactttgcttcaggtaagagttgcagaaattgatgaagcagaaggcattttc
tctactttaatgggtgacgttgttgaacctcgcaggttatttatccaagcaaatgcgttg
aatgtcgtgaatttggatgtgtag
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integrated database retrieval system
