Rickettsia massiliae AZT80: RMB_04250
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Entry
RMB_04250 CDS
T01758
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rmi
Rickettsia massiliae AZT80
Brite
KEGG Orthology (KO) [BR:
rmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rmi03016
]
RMB_04250
Enzymes [BR:
rmi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
RMB_04250
Transfer RNA biogenesis [BR:
rmi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RMB_04250
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Penicillinase_R
DUF5638
Motif
Other DBs
NCBI-ProteinID:
AFB31641
UniProt:
H6QIZ1
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All DBs
Position
742691..743536
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AA seq
281 aa
AA seq
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MQIIDNQKTLEELCNRLANKACLSIDTEFERRYTYYAQLSIIQVKAEEYCGIIDALSNLD
LNIFNKLLADNNITKIFHAPREDLEIFYNLFKTLPANVFDIQIAANICGFGKQLSYDDLC
YKLIGITIDKTHQKSNWLKRPITSDMLNYAMLDVEYLYKIYKELNNIIIRNNLTNKYQTT
LSSLLDVRNYKVESKDAWKKIKYRSDDKSFNHKIQMLAAYREENAQTINIPRKHFILDED
LIKLSKYPPLNHKDFKNLNLKSKYLHKQKYKDEIISLCNNL
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattatcgataatcaaaaaacattagaagaattgtgtaatcggttagcaaataag
gcatgcttaagcatagatacggaatttgagcgtcgctatacttattatgctcagcttagt
ataattcaagttaaagcagaagaatattgcggaataattgatgcattaagcaatttagat
ttgaatatttttaataagctgcttgcagataataatattactaaaatatttcatgctcct
cgtgaagatttagagattttctataatttatttaaaacactacctgctaatgtttttgat
atacaaattgcagcaaatatttgcggcttcggtaaacagctaagctatgatgacctttgc
tataagctcatcggtattactatcgataaaacccaccaaaaatctaactggctaaaacgc
cctattactagtgatatgttaaattatgcaatgttagacgtggagtatttgtataagata
tataaagagttaaataatataattattagaaataatttaactaataaatatcaaactact
cttagttctttattagatgttagaaattataaggttgagtcgaaagatgcttggaaaaaa
ataaaatatagaagtgatgataagagttttaatcacaaaattcaaatgcttgcagcttat
cgtgaagagaatgcacaaactataaatattcctcgtaagcattttattttagatgaagat
ttaataaagcttagtaaatacccgccattgaatcacaaggattttaaaaatctaaattta
aaaagcaaatatttacacaaacaaaaatataaagatgaaataataagtttgtgtaataac
ttatga
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