Rickettsia massiliae AZT80: RMB_04495
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Entry
RMB_04495 CDS
T01758
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
rmi
Rickettsia massiliae AZT80
Pathway
rmi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rmi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RMB_04495 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmi03021
]
RMB_04495 (rho)
03019 Messenger RNA biogenesis [BR:
rmi03019
]
RMB_04495 (rho)
Transcription machinery [BR:
rmi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
RMB_04495 (rho)
Messenger RNA biogenesis [BR:
rmi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RMB_04495 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
AAA_22
ATPase_2
OB_RNB
Fungal_virus_P2_C
Spore_III_AA
S1CSD-TOTE-2
NACHT
AAA
Mor
Motif
Other DBs
NCBI-ProteinID:
AFB31682
UniProt:
H6QJ32
LinkDB
All DBs
Position
complement(773871..775247)
Genome browser
AA seq
458 aa
AA seq
DB search
MSTTNKESTAELNNTESNNNHNNFTENGNIINLKQLKRKLPEELQAQAEELKIENINSLL
KQELVFAILKKSVEQGGLIVGEGVLEVLPDGFGFLRSPEVNYLAGPDDIYISPSQIRRFG
LRTGDTVEGQIRAPKAGERYFALLKVNRVNFEDPFKAYHRVHFDNLTPLYPDEKLGLELE
NNSKDSKDFSTRVIELVAPMGKGQRALIVAPPRTGKTVLLQNIAHAITTNNPEVFLIVLL
IDERPEEVTDMQRSVRGEVVSSTFDEPASRHVQLAEMVIKKAKRLVEHKKDVVILVDAIT
RLARAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIENGGSLTIIGTALIETGSRMD
EVIFEEFKGTGNSEIVLDRKIADKRIYPAIDITRSGTRKEDLLVDKIILNKMWVLRRIID
PMGSSEAIEFLLKKLENTKTNGEFFEMMKSPERPKNGL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaactaataaagaatccacagcagaacttaacaataccgaatccaataacaat
cataataattttacagagaacggtaatattattaatttaaaacaattaaaacgtaaatta
ccggaggaactacaagctcaagcagaagaattaaaaattgaaaatattaattcattactt
aaacaagaattagtttttgcaattttgaaaaaatccgtagagcagggaggtttaatagtg
ggagagggggtacttgaagtactacctgacggatttggttttttacgttcgccggaagta
aactacttagcaggccctgatgatatttatatttctcctagtcagattcgtcgctttggt
ctgcgtaccggtgatacggtagaaggtcagatcagagctccaaaagccggagaacgttat
tttgctttactgaaagtcaatagagtaaattttgaagacccttttaaagcttatcatcgt
gttcattttgataatttaacccccttatatcctgatgaaaaattaggattagaacttgaa
aataatagtaaagatagtaaggattttagtacacgggttattgaacttgttgcccctatg
ggtaaaggacaacgtgcattaatagtagcaccgcctcgtacaggtaaaaccgtattatta
caaaatatagcacatgcaattacaaccaataatccggaagtatttttaatagtactgtta
atagacgaaagacctgaagaagtaaccgatatgcaacgttccgtgcgtggggaggttgtt
agctctactttcgatgaaccggcaagtaggcacgtacaacttgcagaaatggttatcaaa
aaagcaaagcgtttagtagaacataaaaaagacgtggtaattttagtagatgcgataaca
cgtttagctcgtgcttataataccgtagtgccgtcatcaggtaaagtattaacgggcggt
gttgatgctaatgctcttcagagacctaaaagatttttcggagcagcaagaaatattgaa
aacggcggttcgcttactataatcggtacggctttaattgaaaccggttctcgtatggat
gaggtaatttttgaggagtttaaaggtacaggtaattccgagatagttctagatcgtaag
attgccgataagcgtatttatccggctattgatataactagatcaggcactagaaaagaa
gatttattagtagataaaataatattaaataaaatgtgggttcttcgtcgtattatcgat
ccgatgggtagcagtgaagcaatagaatttttactcaaaaaacttgaaaatactaaaact
aacggtgagttttttgagatgatgaagagtcctgaacgtcctaagaacggtctatag
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