Rickettsia massiliae AZT80: RMB_05210
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Entry
RMB_05210 CDS
T01758
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rmi
Rickettsia massiliae AZT80
Pathway
rmi00470
D-Amino acid metabolism
rmi00550
Peptidoglycan biosynthesis
rmi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rmi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RMB_05210 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RMB_05210 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rmi01011
]
RMB_05210 (murD)
Enzymes [BR:
rmi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
RMB_05210 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rmi01011
]
Precursor biosynthesis
Amino acid ligase
RMB_05210 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
PheRS_DBD1
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
AFB31803
UniProt:
H6QJF3
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All DBs
Position
complement(902436..903932)
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AA seq
498 aa
AA seq
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MNSHTKQKIGVFGLGKTGISVYEELQNKYDVIVYDDLKANRDIFEELYSKTAIAALSDSR
WQNLDTIVLSPGIPLTHEIVNIAKNFNIPITSDIDLLFAKSKNLKFIAITGTNGKSTTTA
LISHILNSSGLDYPVAGNIGVSALQAKASKDGYVLELSSFQLDLVKTFTAKIAVLLNITP
DHLDRHQDMTCYIAAKSKIFDRMDQESYAVINIDNDYCREVFIKLQQEQRIKLIPFSVTK
ILENGISVVDDKISANFFDDISFELQRNSESFRQDEFQGEPAERIKIREHRRDLQNSPVS
SFMYYAVPFNKNLQGVHNCENIAASYAVAKIIGVEPQKILESINSFQSLPHRMQYIGSIN
NISFYNDSKATNAISAVQSIKALDNIYWLAGGIPKEGGIKEIKPYFSQIKKAYFYGQAKE
IFANTAKNIVDFVICDNLEQAFDLAYKDAVGDNAEVKNILLAPSCSSYDQFKNFEERGEL
FIKLCSILSPRGLTTGSS
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaattctcatacaaaacaaaaaataggtgtttttgggcttggtaaaaccggtatatcg
gtttacgaggaattgcaaaataaatatgatgtaattgtttatgatgatttaaaagcaaat
agagatatatttgaagaattatatagtaaaaccgctatcgctgctttatctgattcaaga
tggcaaaatttagatacaattgtcttaagtcctggaattcctttaacgcatgagatagtc
aatattgcaaaaaattttaatattcccatcacttctgatatagacttattatttgcaaaa
tcaaaaaacttaaaatttatagctataaccggtacaaacggtaaaagtactactactgct
ttaataagccatatcttaaatagtagcggtttagactatccggttgccggtaatattgga
gtttctgctttgcaagctaaagcaagtaaggatggatatgtacttgaattgtcttctttt
cagctagatctagtcaaaacctttacagctaaaatagccgtgcttcttaatataactccc
gaccatttagatagacatcaggatatgacctgctatattgcagcaaaatctaagatcttt
gatcgaatggatcaagagagttatgcggtaattaatatcgataatgattattgtcgtgaa
gtctttataaaattgcagcaagagcagcgtataaagctaattcctttttcggttactaaa
attcttgaaaacggtatttcggtagttgatgataaaattagcgctaatttttttgatgat
ataagttttgaattacagcgtaattcagaaagttttagacaagatgaatttcaaggtgag
cctgcggagcgtataaaaatacgtgaacacaggcgagacctgcaaaattcgcctgtatca
agctttatgtattatgctgtaccttttaataaaaacctgcaaggagttcataattgtgag
aatattgcagcaagttatgcagtagctaaaataataggagtagaacctcaaaaaatactt
gaatctataaatagttttcaaagtttacctcatagaatgcaatatatcggtagtataaat
aatataagtttttacaatgatagtaaagcgacaaatgccatatctgccgtgcaatcaatt
aaagcactcgataatatttactggcttgcgggaggaattcctaaagagggtggtattaag
gaaataaagccttatttcagtcaaattaagaaagcttatttttatggtcaagctaaagaa
atatttgcaaatactgctaagaatatagtagattttgtaatatgtgataatcttgagcag
gctttcgatcttgcttataaggatgcagtaggtgataacgcggaggtaaaaaatatcttg
ttagcacctagttgtagctcatatgatcagtttaaaaattttgaagagcgtggcgagttg
tttataaaattgtgtagtatcctgtcaccccgtggcttgaccacggggtctagttaa
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