Rickettsia massiliae AZT80: RMB_05350
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Entry
RMB_05350 CDS
T01758
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
rmi
Rickettsia massiliae AZT80
Pathway
rmi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RMB_05350 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmi03400
]
RMB_05350 (ruvB)
Enzymes [BR:
rmi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RMB_05350 (ruvB)
DNA repair and recombination proteins [BR:
rmi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RMB_05350 (ruvB)
RecFOR pathway proteins
RMB_05350 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
WHD_RuvB
AAA
AAA_5
Mg_chelatase
TIP49
AAA_14
RNA_helicase
bpMoxR
AAA_22
Bac_DnaA
nSTAND3
NB-ARC
AAA_16
AAA_3
Rad17
AAA_18
AAA_17
DUF815
ABC_tran
AAA_24
Parvo_NS1
Sigma54_activ_2
AAA_28
AAA_11
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AFB31831
UniProt:
H6QJI1
LinkDB
All DBs
Position
complement(931704..932735)
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AA seq
343 aa
AA seq
DB search
MTNILLLSEKSENDQELPIRPSYLQEFVGQQQIKENLSVFIKAAKSRNEHLDHTLFYGPP
GLGKTTLAKIISNEIGGNFKSTSGPAILKVADLAAILTNLERNDVLFIDEIHRLNTAVEE
VLYPAMEDFELDIIIGEGSAARSVKITLPKFTLIGATTRLGLLSNPLRDRFGIPMRLNFY
NTEELKKVLNRASKLLDIDLTDSGSEEIAKRSRGTPRIALRLLRRIRDFAAVDGKSRVDK
EISDFGLNRLEVDRIGLDSNDYRYLKFIADNYNGGPVGIETIAAALSEQRDALEETIEPY
LIQIGLLQRTPRGRVITIAAFEHLKMPVPNQSHHQFNIFNENE
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgactaatatattattattatctgaaaaaagtgaaaatgatcaagaattgccgataagg
ccgtcatatttgcaagaatttgtcggtcaacagcagattaaagaaaatctttcggtattt
attaaggctgcaaaatctcgaaatgagcatcttgatcatactttattttacggtccgccc
gggcttggtaaaactacgcttgctaaaattatctctaacgaaatcggcggtaattttaaa
tccacctccggtcctgctatacttaaggtagctgatcttgctgctattcttaccaatctt
gaaaggaacgatgtattatttattgatgaaatccaccgcttaaatactgcggttgaagag
gttttatatcctgctatggaagattttgagcttgatataattatcggtgaaggatctgcc
gcaaggtcagtgaaaataaccttgccgaaatttaccttaatcggtgctaccacacgcctt
gggctgcttagtaatcctttgcgtgataggttcggtattcctatgcggctaaatttttat
aataccgaggaattgaagaaagttctaaatagagcaagtaaactacttgatattgatttg
accgattcgggttctgaagaaatagctaaacgaagtagaggaacgccaagaattgcatta
agattgcttcgtcgtataagagattttgcagcagtggacggtaaatcaagagtagataag
gaaatctctgattttgggttaaatcgtttggaagttgatcgcatagggcttgatagcaat
gattatcgttatctaaaattcatagcggataattataacggtggtcctgtcggaattgaa
acgatcgcagctgccttgtctgaacaacgtgacgcacttgaagaaaccatagagccttat
cttatacagataggtttactacaaagaactcctagaggtagggtaatcacgattgccgct
tttgagcatttgaaaatgcctgtaccgaatcaatcacatcatcaatttaatatttttaac
gagaatgaataa
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