Rickettsia massiliae AZT80: RMB_07000
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Entry
RMB_07000 CDS
T01758
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rmi
Rickettsia massiliae AZT80
Pathway
rmi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RMB_07000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmi03400
]
RMB_07000
Enzymes [BR:
rmi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RMB_07000
DNA repair and recombination proteins [BR:
rmi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RMB_07000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Nop
Motif
Other DBs
NCBI-ProteinID:
AFB32106
UniProt:
H6QKB0
LinkDB
All DBs
Position
complement(1209488..1210273)
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AA seq
261 aa
AA seq
DB search
MNNTLKWLSAIGVEYYCHEHPTQLKVRNNTELTEKPQVKLKSTKETAFNMNDKVHDNITL
SRSLADKANNIEELKESLLNFNGCELKKFATNTVFGDGNLEAKIMLIGEAPGSTEDLKGI
PFYGESGNLLDNMLHAIGISRKNNAYITNTVFWRPPANRQPTFEEVDICRPFVEKHIALI
NPKLIILVGSTAATSLLGKNSGITKIRQEYYFYTNKYLSAPIQTTAIFHPAYLLRQPMQK
RTSWYDLLKIKEYVVNNRLLA
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgaataatacgcttaaatggttaagtgcaatcggtgttgaatattattgccatgaacat
ccaacgcaattaaaggtacgtaataatactgaactaactgaaaagccacaagtaaaactt
aagtctacaaaagaaactgcattcaatatgaatgataaagttcatgataatataacccta
tcaagatctcttgccgataaagctaataatatcgaagaactaaaagaatctctactaaat
tttaatggttgtgaacttaagaaatttgctactaatacggttttcggtgacggtaatttg
gaagctaaaattatgttaataggcgaagccccgggaagtaccgaagatttgaaaggaata
cctttttatggcgaaagtggcaatttacttgataatatgttacacgctatcggaatttca
cgaaaaaataacgcttatattactaatacggtattttggcgtcctcctgctaatagacag
ccgacgttcgaagaggtcgatatttgtagaccttttgtcgagaagcatattgctcttatt
aacccgaagctaattattctagtcggtagcacggctgcaactagcttacttggaaaaaat
tcgggtattactaaaattagacaagaatattatttttataccaataaatatctatccgct
cctattcaaactacggcaatcttccaccctgcctatttactccgccaacctatgcaaaaa
cgcacctcttggtatgatttactcaagattaaggagtatgtagtcaataatagacttctt
gcataa
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