Rickettsia massiliae AZT80: RMB_07285
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Entry
RMB_07285 CDS
T01758
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rmi
Rickettsia massiliae AZT80
Brite
KEGG Orthology (KO) [BR:
rmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rmi03016
]
RMB_07285 (truA)
Enzymes [BR:
rmi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
RMB_07285 (truA)
Transfer RNA biogenesis [BR:
rmi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RMB_07285 (truA)
Prokaryotic type
RMB_07285 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AFB32149
UniProt:
H6QKF3
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All DBs
Position
1249196..1249933
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AA seq
245 aa
AA seq
DB search
MYRYKITIEYLGTDLAGWQRQAGVMSVQQILEEAIYKFSGEQVILFGSGRTDAGVHAIGQ
VAHFDLSKYLEPHKIITAINYFARPYAVGVWNCELAPNNFHARFSATSRYYIYRIINRPY
PSVIDLNRAWWISSPLDVPAMQQATAYLLGKHDFTSFRASSCQSKSPIKTLTELNIIKED
EEIKLYLSAPSFLHHMVRNIVGSLVLVGKNIWQAEQIKDVLEAKDRKAAGPTAPAAGLYF
VKAAY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgatataaaattaccattgaatatttaggcacagatcttgcaggttggcaaaga
caagcaggagtaatgtcggtacagcaaatattagaagaagcgatttataagttttccggt
gaacaggtgatattgtttgggtcaggaaggacagatgctggtgttcatgctataggtcaa
gtagcacattttgatctttcaaaatatttagaacctcacaaaattattacggctatcaac
tattttgcaagaccgtatgccgtaggagtatggaattgtgaattagcccccaataatttt
catgctaggttttcagctacctctcgttattatatatatagaattattaatagaccttat
ccatcggtaattgatttaaatagagcatggtggattagttcacctttagatgttccggct
atgcaacaagctaccgcttatctattaggcaaacatgattttacttcatttagggctagc
tcatgtcaatcaaaatcaccaattaaaactttaactgaacttaatattattaaagaagac
gaagaaataaaattatatctttcagccccgtcatttttgcatcatatggtacgtaatatt
gtcggcagtttagtacttgttggtaaaaatatttggcaggcagaacaaattaaagatgtt
ctagaggccaaagatagaaaagccgccggtcctactgctcccgccgccggtctttatttt
gtgaaagcagcgtattaa
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