Rhodoferax mekongensis: RAN89_00665
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Entry
RAN89_00665 CDS
T10170
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rmk Rhodoferax mekongensis
Pathway
rmk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RAN89_00665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmk03400
]
RAN89_00665
Enzymes [BR:
rmk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RAN89_00665
DNA repair and recombination proteins [BR:
rmk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RAN89_00665
Prokaryotic type
RAN89_00665
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WNO04970
UniProt:
A0ABZ0B035
LinkDB
All DBs
Position
complement(153279..154028)
Genome browser
AA seq
249 aa
AA seq
DB search
MQLSLLVGESDPAANGQRASQLRSADPDQWPVDPSWESVKNAFFRSAQGQALCARLQRRL
DEGAVIFPPEPLRALSLTALGDVRVVILGQDPYHGHGQAEGLAFSVAQGVAVPPSLRNIF
KELAREGEAAVTLFPVTAGSLQPWAQRGVLLLNTCLTVEEAQPASHSKWGWEVFTDMVIR
EVSDQTPGVVFMLWGAHAQAKQALIDPEKHLVLCANHPSPLSASRPPAPFIGCGHFAQAS
RWLQAGIRD
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgcagctctccttgctggtcggtgagtcggatcctgctgcaaacgggcagcgcgctagc
cagttgcggtctgccgatcccgatcagtggccggttgacccgagctgggagagtgtcaag
aacgcattttttcggagcgcgcagggccaagcgttgtgtgcacgtttgcagcgcaggctg
gatgagggggctgtgattttcccgcctgagcccttgcgggcgctgtccctcacggccttg
ggtgatgtgcgggtagtcatcctcgggcaggacccctaccacggacatggccaggcggag
ggtttggccttttcggtggcgcagggcgttgcagttccgccgtcccttcgcaatatcttc
aaagagcttgcgcgggagggtgaagcagcggtcaccctgtttcctgtgacggcaggtagt
ttgcagccttgggcgcaacggggcgtgttgctcttgaatacctgcttgacggtcgaagag
gcgcagccggccagccattccaagtggggctgggaggtgtttaccgatatggtcatccgc
gaggtctccgaccagacgccgggtgtggtttttatgctgtggggcgcacatgcgcaggca
aagcaggccttgatagaccctgaaaaacacttggtcttgtgtgcgaatcatccatccccg
ctctcggcgtcacggccgccggccccatttatcgggtgcggccatttcgcccaagcaagc
cgttggttgcaagctggaattcgggattga
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