Rhodoferax mekongensis: RAN89_00890 Help Entry RAN89_00890       CDS       T10170                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism rmk  Rhodoferax mekongensis Pathway rmk02020   Two-component system rmk02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:rmk00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     RAN89_00890  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     RAN89_00890  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:rmk03021]     RAN89_00890 Transcription machinery [BR:rmk03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      RAN89_00890 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_38 HTH_IclR HTH_23 Motif Other DBs NCBI-ProteinID:  WNO05011 UniProt:  A0ABZ0B0U9 LinkDB All DBs Position complement(193782..195380) Genome browser AA seq 532 aa AA seqDB search MKQGLSLRVSQHLALTPQLQQSIRLLQLSTLELSQEVEQMLDENPFLELTEERAEREDFG LDAVDAPVSDGDRLSEEADFAPHSIADYASSTSASSSNEDETTPLSGSDEPDWEGDGTTE MTPDDGEWGVDAKAKTNNLDDDEQKDATELARSGESLQSFLHRQAAALRLSAEDAAALRF LIESLNDDGYLEDPLAELAQSLHPADEEQLHELVHHFTVALGLLHSLEPVGVGARDLGEC LRLQLRALLTTADEDGELDRTEVLQVALAICKQPMELLARRDIKRLVQAGVGSDALVREA IALIARLEPKPGRRFMDVERNIVVPDVLVVPIGKVGGMPKFRVQLNPDVMPRLKVHDIYA NVLRNHKASSSHAGLQQRLQEARWFIKNIQQRFDTILRVSTAIVERQKNFFTHGELAMRP LVLREIADELGLHESTISRVTTAKYMATPFGTFELKYFFGSGLGTESGGNASSTAVRALI KQFIASESPKKPLSDNQISDMLKEQGIECARRTVAKYREGLKIAPASLRKAL NT seq 1599 nt NT seq  +upstreamnt  +downstreamnt atgaagcaaggattgtctttacgcgtctcgcagcatctggcgctcaccccgcagctgcaa caatccatccgcttgctgcaactctccacgctggagctcagccaggaggtggagcagatg ctggacgaaaaccccttcctggagctcaccgaagagcgtgctgagcgggaagactttggc ctggatgcggtggatgcaccggtgagtgatggagaccgtctatccgaagaggctgacttt gctcctcattcgatagctgactacgcaagcagtacaagcgctagcagctcgaatgaggat gagacgactccgctgtccggcagcgatgaacccgactgggagggcgacggcaccactgag atgacccccgacgacggcgaatggggtgtggatgccaaagccaaaaccaacaacctggac gacgacgagcagaaggatgcgaccgaactggcacgttcgggcgagtctttgcagtccttt ctgcaccgccaagccgccgctttgcgcttgagcgccgaggatgcggccgcactgcgcttc ctgatcgagtccctcaacgacgacggctacctggaagacccgctggccgagctagcccag agtctgcaccctgccgacgaagagcagctccacgaactggtgcaccacttcactgtggca ttgggcctgcttcacagcctggaaccggtcggtgtcggtgcgcgtgacttgggtgaatgt ttgcgcttgcaactgcgggcattgctgaccaccgcggatgaagatggcgaattggatcgc actgaggtactgcaggtggctttggccatttgcaagcaacccatggaactgctggcccgt cgcgacatcaagcgcctcgtgcaagcaggtgtgggtagcgatgctctggtgcgcgaggcc attgcactcatagcccgtctggagcccaagcccggccgccgctttatggatgtggagcgc aatatcgtcgtgcctgatgtgctggtggtgcccatcggcaaggtgggcggaatgcccaaa ttccgggtgcaactgaatccggatgtgatgccgcgcctcaaggtgcacgacatttacgcc aatgtgctgcgcaaccacaaagccagctccagccacgccggtctgcagcagcgcctgcag gaggcgcgctggtttatcaagaacatccaacagcgctttgacaccatcctgcgcgtgagc acagcgattgtggagcgtcaaaaaaacttcttcacccatggcgaactggccatgcgcccg ctggtgctgcgcgaaattgcagacgaactgggcttgcatgaatccaccatcagccgggtg accactgccaaatacatggcgacgcccttcggcacgtttgagttgaagtacttcttcggc tccggcctgggcactgagtctggcggcaacgcctccagcacggcggtgcgggcgctgatc aagcagttcatcgcttccgagagcccgaaaaagcccttgagcgacaaccagatttccgac atgctcaaagagcagggcattgaatgcgcccggcgcaccgtggccaaataccgcgagggc ctgaagattgcccccgcctcactccgcaaagcgctatga

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