Rhodoferax mekongensis: RAN89_02075
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Entry
RAN89_02075 CDS
T10170
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rmk Rhodoferax mekongensis
Pathway
rmk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RAN89_02075 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmk03019
]
RAN89_02075 (recQ)
03400 DNA repair and recombination proteins [BR:
rmk03400
]
RAN89_02075 (recQ)
Enzymes [BR:
rmk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RAN89_02075 (recQ)
Messenger RNA biogenesis [BR:
rmk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RAN89_02075 (recQ)
DNA repair and recombination proteins [BR:
rmk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RAN89_02075 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HHH
Motif
Other DBs
NCBI-ProteinID:
WNO05232
UniProt:
A0ABZ0B0F5
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All DBs
Position
427451..429298
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AA seq
615 aa
AA seq
DB search
MPHLQILHDVFGYQAFRGPQQAIVEHVIAGGDALVLMPTGGGKSLCYQVPAIARQQAGLG
ATLVISPLIALMHDQVGALHEAGVSAAFLNSTLTSDEAYHVEQQLLRGEITLLYAAPERV
SNARFLALLDSLFERGKLSLFAIDEAHCVSQWGHDFRPDYRNLTVLHERYPGVPRIALTA
TADDLTRADILERLQLEEARAFVSSFDRPNIRYTIVEKKDSTTQLLRFIEREHEGEAGIV
YCQSRKKVEDMAQTLVDAGIKALPYHAGLDAKVRQLNQDRFLREEGIVMVATIAFGMGID
KPDVRFVAHRDMPKNIEGYYQETGRAGRDGLPADAWMAYGLQDVVNQRRMIDESPASEEF
KQVMRGKLDALLGLAEATDCRRVRLLGYFGEKSQPCGNCDNCLHPPEVWDGTDAARKLLS
TIYRIQQMSGVSFGAGHLMDIVRGKTTEKVTQYSHESLSTFGIGKDFTELQLRGVLRQLI
AMGAVAVDAQAFNTLQLTAESRAVLKGEVAVMLRESVSAPADRKPRRNARLGAVVKAPIN
LDSEGLLRYSALKAWRAEVAQQHNLPAYVIFHDATLAAIAQRAPQSIDDLQGISGIGAKK
LEAYADDVLKVVALQ
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
gtgcctcacctgcagattcttcacgatgtatttggctaccaggccttccgcgggccccag
caagccatcgtggagcatgtgatcgcgggcggggatgcgctggtgcttatgcccacgggc
ggtggcaaaagcctctgttaccaggttcctgccattgcccgccaacaagcgggcctgggt
gcgacgctggtcatttcccccctgattgcgctgatgcacgaccaggtgggcgccctgcat
gaagccggggtgagtgcagcttttctgaactctaccctcaccagcgacgaggcctaccac
gtcgagcagcaactgctgcgcggcgagatcaccctgctctacgcggcacccgagcgggtc
agcaacgcacgctttctggccttgttggattcgctctttgagcgtggcaagctgagcctg
tttgcgatcgatgaagcccactgcgtgagtcagtggggccacgacttccggcccgactac
cgcaacctcaccgtgttgcatgagcgctaccccggcgtaccacgtatcgccctgacggct
acggcagacgacctgacccgtgccgacattctggaacgtttgcagctcgaagaggcccgt
gccttcgtcagcagtttcgaccgacccaacatccgctacacgattgtcgaaaagaaggac
tccaccacccagttgctgcgcttcatcgagcgcgagcatgagggagaggccggcatcgtc
tactgccagagccgcaaaaaagtggaagacatggcgcagaccttggtggatgcgggtatc
aaagccctgccttaccacgcgggtttggatgccaaagtacgccaactaaaccaggaccgg
tttttgcgcgaggaaggcatcgtcatggtggccaccattgctttcggcatgggcatcgac
aagccggacgtccgttttgtcgcccaccgcgacatgcccaaaaacatcgagggctactac
caggagactggccgcgccgggcgtgacgggctgccggccgatgcctggatggcctatggc
ctgcaagacgtggtgaaccagcgccgcatgattgacgaaagcccggccagcgaagagttc
aaacaggtcatgcgcggaaagttggacgccttattgggcttggcggaagccaccgattgc
cgccgcgtccgcttgctgggctactttggcgagaagagccaaccctgcggcaactgcgac
aactgcctgcatccacccgaggtgtgggatggcacggatgctgcccgcaaactgctcagc
accatttaccgcatccagcaaatgagcggggtaagcttcggcgcgggccacctgatggac
atcgtgcgcggcaagacgaccgagaaagtcacccaatacagccacgagagcctgagcacc
ttcggaatcggcaaggatttcaccgagttgcaattgcgcggtgtactgcgccagttgatt
gccatgggcgccgtggccgtggatgcgcaggctttcaacaccctgcaattgactgcagag
tcgcgcgcagtgctcaagggcgaagttgcagtgatgttgagggagtcggtgtcagcgccg
gcagatcgcaagccacggcgcaatgcgcgcttgggcgctgtggtcaaggcgcctatcaat
ctcgacagtgagggtttgctacgttattccgccctgaaggcatggcgtgcagaggtggcg
cagcagcacaatctgccggcctatgtgatttttcacgatgcaaccttggcggccattgca
caacgtgcccctcaatctatcgacgatttgcagggcatcagcgggattggagcgaagaag
ctggaggcttatgccgacgacgttttgaaggttgtcgcgctccagtaa
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