Rhodoferax mekongensis: RAN89_03405
Help
Entry
RAN89_03405 CDS
T10170
Name
(GenBank) PBP1A family penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
rmk Rhodoferax mekongensis
Pathway
rmk00550
Peptidoglycan biosynthesis
rmk01100
Metabolic pathways
rmk01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rmk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RAN89_03405
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RAN89_03405
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rmk01003
]
RAN89_03405
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rmk01011
]
RAN89_03405
Enzymes [BR:
rmk01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
RAN89_03405
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RAN89_03405
Glycosyltransferases [BR:
rmk01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
RAN89_03405
Peptidoglycan biosynthesis and degradation proteins [BR:
rmk01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
RAN89_03405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PCB_OB
SHOCT
GvpG
Motif
Other DBs
NCBI-ProteinID:
WNO05491
LinkDB
All DBs
Position
698123..700411
Genome browser
AA seq
762 aa
AA seq
DB search
MQTTSWGPWPMRILKTGLVLAVLGALFLAAAVAFFSTQLPDTSSLSNYQPKQPLRVLTAD
GVEVAGFGTERRVYKPIDQIPKLMKDSLLAVEDSRFYSHGGLDPIGVARALVANLTGGRT
QGASTITQQVARTFFLSRSRTLERKIKEALLAYKIESQLSKDQILELYMNQIYLGARAYG
FEAAAQAYFGKTLSALSAAECAMLAGLPQNPYFANPIQNFERARTRQLVALSRMRSEGVI
DEAQYQAAKAEKLAVRKRNEVDVHAEYVAEMVRQQVYAQFGELSYTTGLNVTTTLRAADQ
QVAYKALRHTLVEHSLRQVWRGPEGQENLAADLKDEDPAVAQALADYDDDEDLRIAIVTR
ASAKAVSVVLGSGEAITIDGTGLRPAQSGLGDSAAAKLKLRRGSVVRVLQQGKAWSLVQW
PEAEGAFVSMDPANGEIRALVGGFDFHRNQFNHVTQGWRQPGSSYKPFIYSGAIESGMQP
ESLVNDAPMENVGDWAPENDDGSTDGPITLRRALARSKNLVSIRLMQLLSPVGAREWTSR
FGFDPERQPDNLTQALGTGSTNPLQMAGAYSVLANGGYRVNPVLIQKIARASGEVVFEAK
PQVLDETVRAVPQRNTFMVSSLLQEVTRTGTAAKAQATLKRPDLYGKTGTTNDVVDAWFA
GYQPGLVAVVWVGYDTPRSLGSRASGSALALPAWIDYMATALKNVPVQEVQPPAGVVRVG
GDWRYEEWANGGFLESIGVDGQAISPALAVRPSSEGVQGPSP
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccacttcctggggcccctggcccatgcgcatcctcaaaaccggcctggtgttg
gcagtgctgggtgccctgtttctggccgctgcggtcgcgtttttctcgacccagctgccg
gatacatcttccctctccaattaccaacccaagcaaccgctgcgtgtgctcacggccgat
ggtgtggaggtagccggtttcgggaccgaacgccgggtctacaaacccattgaccagatc
cccaagctgatgaaagacagcctgctggctgtggaagactcgcgcttttacagccatggc
gggttggaccccatcggcgtggcgcgggccctggtggccaacctgaccggagggcgcacc
cagggcgcgtccaccatcacccaacaggtggcgcgcactttctttttgagccgctcgcgc
acgctggagcgcaagatcaaggaggcactgctggcctacaaaatcgagtcccagctcagc
aaagaccagattctggagctctacatgaaccagatctacttgggcgcgcgggcatacggc
tttgaagcggcagcgcaggcctatttcggcaaaacgctgtctgcgctcagtgcggccgag
tgcgccatgctggccggcctgccgcagaacccgtactttgccaaccccatccagaatttc
gagcgcgcacgtacccgccagctggtcgccttgagtcgcatgcgatcggaaggtgtgatc
gacgaagcgcagtaccaggcagccaaggctgaaaagctcgcggtgcgcaaacgcaatgag
gtggatgtgcacgcggagtacgtggccgagatggtgcgccagcaggtctatgcccagttc
ggtgagctgagctacaccaccggcctcaacgtcaccaccactttgcgtgctgcggaccag
caggtggcctacaaggcgctgcgtcacacgctggtggagcactcgctgcgccaggtctgg
cgtggtccggaggggcaggagaacctcgctgccgacttgaaggacgaagatccggccgta
gcccaggcgctcgccgactacgacgatgacgaagacctgcgcatcgccatcgtcacccgt
gccagtgccaaggcggtcagcgtggtgctgggctcgggtgaggcgatcaccattgacggt
accggcctgcgccctgcgcagtctggcttgggtgactctgcagctgccaagctgaagctg
cgccgcggctcggtggtgcgggtgctgcaacagggcaaggcctggagcttggtgcagtgg
cccgaggccgaaggggctttcgtgtccatggatccggccaatggcgagattcgcgcgctg
gtgggcggtttcgactttcaccgcaaccagttcaaccacgtgacccaaggctggcggcaa
ccgggttccagctacaagcccttcatttactccggagccatcgagagcggcatgcagccg
gaatccctggtgaacgacgcgcccatggaaaacgtgggtgattgggcacccgaaaacgat
gacggcagcaccgacggccccatcaccttgcgccgcgcgctggcccgctccaagaacctg
gtgtccatccgcctgatgcagctgctttcaccggtgggggcccgcgagtggaccagccgc
ttcggtttcgaccccgagcgccagcccgacaacctgacccaggctttgggcactggctcc
accaaccccctgcaaatggcgggtgcgtattcggtgctggccaacggcggctaccgcgtg
aacccggtgttgatccagaagattgcccgcgccagtggcgaagtggtgtttgaagccaag
ccccaggtgctggacgagaccgtgcgcgccgtgccgcaacgcaataccttcatggtgtcc
agtcttttgcaagaggtcacccgcaccggcacggcggccaaagcccaagccaccctcaag
cgcccggacttgtatggcaaaacaggtaccaccaatgacgtggtggacgcctggttcgcg
ggctaccaacccggcctggttgcggtggtctgggtgggctatgacacgccgcgcagcctg
ggatcgcgagcctccggttctgcactcgccctgccggcatggatcgactacatggccacc
gcactcaagaacgtgcccgtgcaggaagtgcagccaccagcaggcgtggtccgcgttggt
ggagactggcgctacgaggaatgggccaatggaggttttctggagagtattggggtcgat
ggccaagccatctcgcccgcgctggccgtgcgaccaagctcggagggggtgcagggccca
tcgccataa
DBGET
integrated database retrieval system
