Rhodoferax mekongensis: RAN89_04150
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Entry
RAN89_04150 CDS
T10170
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rmk Rhodoferax mekongensis
Pathway
rmk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RAN89_04150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmk03400
]
RAN89_04150
Enzymes [BR:
rmk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RAN89_04150
DNA repair and recombination proteins [BR:
rmk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RAN89_04150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WNO05634
LinkDB
All DBs
Position
856798..857679
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AA seq
293 aa
AA seq
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MALQLDERQRAMLLEMGVRVWLPGTDFALAADNAVAVQAPALPARAMPLAPVGAVSAAEQ
RPASPATPVTPVSRPVSVQAASVAAGATASAPIQASALAALDWDGLADTAAACESCGLCA
GRKHATLQPAQQAQADWMVVGDPPEEDEDSAAQAFVEAPGLLLDNMLKAVGASRSGSGPQ
GAYATNVVKCRPPHGRNPQPADLAQCAAYLQREIELVQPKVIFAVGRFAVQTLLSEHGAL
ATQPLGKLRGSVYRYRGIPVVVSYHPKLLLRNSADKAKAWADLCLAMDALSAP
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggcactgcaactcgacgagcgccaacgcgccatgctgctggaaatgggcgtgcgtgtg
tggctgcccggcactgatttcgccctcgcagcagacaacgcagtggccgtgcaggcccct
gcactgcctgcacgtgccatgcctcttgcacccgtgggcgccgtgtctgcagcggagcag
cgcccggcctccccagccacgccggtgacgccggtgagccgacccgtatccgtacaggcc
gcttcggtcgctgcaggtgcaacagccagtgccccgattcaagcttccgctttggcagcg
ctggactgggacggtttggccgatacggcggctgcctgcgagtcctgtggcttgtgcgcc
ggacgcaagcacgcgaccttgcaacccgcacagcaagcgcaggccgactggatggtggtg
ggcgacccgcccgaggaagatgaagatagtgccgcccaggcctttgtggaagcgccgggc
ctgttgctggacaacatgctcaaagccgtaggcgccagccgctccggcagtggcccgcaa
ggtgcctatgccaccaatgtggtgaagtgccgtccaccgcatgggcgcaacccccagccg
gcagacctggcccaatgtgcggcctacctgcagcgcgaaatcgagctggtgcaacccaaa
gtgatctttgccgtggggcgcttcgccgttcaaacgctgctgtcggaacatggcgctttg
gcaacccaaccgctgggcaagctgcgcggttctgtctaccggtaccggggcatcccggtg
gtggtaagttaccaccccaagctgctgctgcgcaacagcgccgacaaggctaaggcctgg
gccgatttgtgcctggccatggacgccttgtccgctccctaa
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