Rhodoferax mekongensis: RAN89_04910
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Entry
RAN89_04910 CDS
T10170
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
rmk Rhodoferax mekongensis
Brite
KEGG Orthology (KO) [BR:
rmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rmk03009
]
RAN89_04910 (dbpA)
Enzymes [BR:
rmk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
RAN89_04910 (dbpA)
Ribosome biogenesis [BR:
rmk03009
]
Prokaryotic type
rRNA helicases
RAN89_04910 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
WNO05776
LinkDB
All DBs
Position
complement(1031553..1032935)
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AA seq
460 aa
AA seq
DB search
MTAFSTLPLAPATLANLQQLGFDAMTPIQAASLPVALAGKDLIAQAKTGSGKTAAFALPL
LAKLNPRWFAVQAMVLCPTRELADQVTVEIRRLARAQDNIKVVTLCGGVATRGQRASLEN
GAHIVVGTPGRIMDLLEREYLTLEGLNTLVLDEADRMLDMGFFEDIVTVARQCPKERQTL
LFSATYPEGIEKLAKQFMQDPQQIKVEAPVADNTIEQRFFEVDRESRFSAVSSILNHFRP
ISTIAFCNTKQQCNELVDTLVADGFVAQALHGDLDQRERDQVLAQFANRSCSVLVATDVA
SRGLDVKELDIVINVDITPDPEVHVHRIGRTGRAGEKGLALSLASMREMGAVGKIEQYQN
APSVWHKLDELTPNGTGRLLPPMVTVQIAGGRKEKIRPGDVLGALTNDEGGPAFTREQIG
KIQVTEFCTFVGVARDVAQAACNKLNAGRVKGKSVRARLL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgacagctttctccacccttcccctcgcacctgccacgctggccaacctgcaacagttg
ggctttgatgccatgacacccatccaggccgccagcctgcccgtggccctggccggcaaa
gacctgattgcccaggccaaaaccggcagcggtaagacggccgcctttgccttgcccctg
ctggccaagctcaacccccgctggtttgcagtgcaagccatggtgctgtgccccacccgt
gagctggccgaccaggtgacggtggaaatccgccgcttggcccgcgcgcaagacaacatc
aaggttgtgaccctgtgcggcggcgtggccacccgcggccagcgcgcttcgctggaaaac
ggcgcgcacattgtcgtgggcacgcccggccgcatcatggacctgctggagcgcgagtac
ctcacgctcgaaggcctgaacaccctggtgctggacgaagccgaccgcatgctggacatg
ggcttttttgaagatatcgtgaccgtggcacgccagtgccccaaagagcgccagaccctg
ctgttttctgccacctaccccgaaggcatcgaaaagctggccaagcagttcatgcaagac
ccgcagcaaatcaaggtggaagccccggtggccgacaacaccatcgagcagcgctttttt
gaggtggatcgcgagtcccgcttcagcgcggttagcagcatcctcaaccacttccgcccg
atcagcacgatagccttttgcaacaccaagcagcagtgcaacgaactagtggacacgctg
gtggctgacggatttgtggcccaagccctgcatggcgacctggaccagcgcgagcgcgac
caggtgctggcccaatttgccaaccgcagctgctcggtgctggtggccaccgacgtggcc
tcccgtgggctggacgtgaaagagctggacatcgtcatcaacgtggacatcacacccgac
ccggaagtgcatgtgcaccgcatcggccgcaccggccgcgcgggcgagaaagggctggcc
ctgagcctggccagcatgcgcgagatgggcgcggtcggcaagatcgagcagtaccagaac
gcgccctcggtgtggcacaagctcgacgagctgactccgaacggcacgggccgcttgctg
ccccccatggtcaccgtgcagattgccggcggccgcaaagaaaaaatccgtcccggcgac
gtgctgggcgcgctcaccaacgacgagggcggccctgccttcacccgtgagcagatcggc
aagatccaggtcaccgagttctgcacctttgtcggtgtggcgcgtgacgtggcccaggcc
gcatgcaacaagctcaatgccggccgcgtcaaaggcaagagtgtgcgagcacgtttgctg
taa
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