Rhodoferax mekongensis: RAN89_05760
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Entry
RAN89_05760 CDS
T10170
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
rmk Rhodoferax mekongensis
Pathway
rmk02024
Quorum sensing
rmk03060
Protein export
rmk03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
RAN89_05760 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RAN89_05760 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RAN89_05760 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rmk02044
]
RAN89_05760 (ffh)
Enzymes [BR:
rmk01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
RAN89_05760 (ffh)
Secretion system [BR:
rmk02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
RAN89_05760 (ffh)
Eukaryotic Sec-SRP protein
RAN89_05760 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
AAA_30
APS_kinase
AAA_16
AAA_22
cobW
Helicase_RecD
AAA_33
AAA_31
AAA_19
AAA_24
nSTAND3
AAA_18
AAA_14
HTH_Crp_2
ResIII
AAA_17
Thymidylate_kin
TsaE
YqeC
ABC_tran
ArsA_ATPase
KTI12
Motif
Other DBs
NCBI-ProteinID:
WNO05933
LinkDB
All DBs
Position
1217135..1218499
Genome browser
AA seq
454 aa
AA seq
DB search
MASALTDKLSRLVKDLRGQGRITESNVTDMLREVRMALLEADVALPVVRDFIARVKEKAL
GQEVLGSLQPGQVLVSIVNRELAATMGEGVSDINLAAQPPAVILMAGLQGAGKTTTTAKL
AKHLIEKRKKKVLTVSGDVYRPAAIEQLKTVTAQAGAEWFPSTPDQNPVDIGRAALDYAK
KHFFDVLLVDTAGRLAIDEALMLEIKNLHAALNPVETLFVVDAMQGQDAVNTAKAFKEAL
PLTGIILTKTDGDSRGGAALSVRQITGAPIKFAGTSEKLDGLEVFDAERHAGRILGMGDI
VALVEQVTAGVDIEAAKKLAEKVKSGGGFDLNDFLAQIQQMKQMGGLSSLMDKLPAAMAA
KAGQVDMDKAEKDIKRKEGIIHSMTPLERRKPELIKATRKRRIAAGAGVHVQEVNRMLKE
FEQMQEMMKRMKGGGMMKMMKRLGGMKGMPKMPF
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgctcttaccgacaaactttcccgcctcgttaaagacctgcgaggccagggg
cgcatcaccgagtccaacgtcaccgacatgctgcgcgaagtgcgcatggcgctgctggag
gccgacgtggctctgcccgtggtgcgcgatttcatcgcccgggtgaaggaaaaagcgcta
gggcaggaagtgctgggttccctgcagcccgggcaggtgctggtcagcatcgtcaaccgc
gagttggctgccaccatgggcgaaggcgtaagcgacatcaacctcgcagcccaaccgccc
gccgtcatcctgatggcgggcttgcagggtgccggtaaaacgacgaccaccgccaaactg
gccaagcacctgattgaaaaacgcaaaaagaaagtactgaccgtgtccggcgacgtgtac
cgtcccgcggcgatcgaacagctcaaaaccgtgaccgcccaagccggtgcggagtggttc
ccctccaccccggaccagaaccccgtggacatcggccgtgccgcgctggactacgccaaa
aagcacttctttgatgtgctgctggtcgacaccgcaggccgcttggcgattgacgaagcc
ttgatgctggaaatcaagaatctgcacgccgcgctcaacccggtcgaaaccctgtttgtg
gtggacgccatgcagggccaggacgcggtcaacaccgccaaggccttcaaggaagccctg
ccactgaccggcatcatcctcaccaagaccgatggtgattcgcgtggcggtgccgcactg
tcagtgcgccagatcaccggcgcacccatcaagttcgctggtaccagcgaaaagctcgat
gggttggaggtgttcgacgccgagcgccatgctggccgcatcttgggcatgggcgacatc
gtggcgctggtggagcaagtcactgccggggtggacattgaggccgccaagaagttggcc
gaaaaggtcaagagcggtggcggctttgacctgaatgactttttggcccagatccagcag
atgaagcaaatggggggcctctccagcctgatggacaagctgcctgcggccatggcggcc
aaggccggtcaggtggacatggacaaggccgaaaaagacatcaagcgcaaggaaggcatc
atccacagcatgacgccgctggagcgccgcaagcccgaactcatcaaagccacgcgcaag
cgccgtatcgccgccggtgcgggtgtgcacgtgcaggaagtcaaccgcatgctcaaggag
tttgagcaaatgcaagagatgatgaagaggatgaagggcggcggcatgatgaagatgatg
aagcggctgggaggcatgaaaggcatgcccaaaatgcccttctga
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