Rhodoferax mekongensis: RAN89_05780
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Entry
RAN89_05780 CDS
T10170
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
rmk Rhodoferax mekongensis
Brite
KEGG Orthology (KO) [BR:
rmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rmk03016
]
RAN89_05780 (miaB)
Enzymes [BR:
rmk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
RAN89_05780 (miaB)
Transfer RNA biogenesis [BR:
rmk03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
RAN89_05780 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
WNO05937
LinkDB
All DBs
Position
complement(1222148..1223485)
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AA seq
445 aa
AA seq
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MSKKVFIKTFGCQMNEYDSDKMADVLGAAQGYEPTDDVEQADLILFNTCSVREKAQEKVF
SDLGRIKHLKAKGVQIGVGGCVASQEGAEIIKRAPYVDVVFGPQTLHRLPEMLNARKALD
KPQVDISFPEIEKFDHLPPAKVEGASAFVSIMEGCSKYCSYCVVPYTRGTEINRPFEDVL
VEVAGLADQGVKEVNLLGQNVNAWRNAMGDSGEMADFATLLEYVSDIPGIERIRYTTSHP
NEFTPSLIAAYEKLPKLVSHLHLPVQHGSDKILMAMKRGYTAMEYKSTIRKLRAIRPDMS
ISSDFIVGFPGETDEDHAKMMKLIHDIGFDNSFSFIFSPRPGTPAANLHDDTPHDVKLAR
LQELQAAINANIARISEQRLGTVQRILVEGSSKRDNGELMGRTECNRVVNFAGNPRLVGQ
LVDVTITETRSYTLRGEVLTTETVA
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaaaagtctttatcaaaaccttcggctgccagatgaacgagtacgactcagac
aagatggccgacgtgctgggtgcagcccagggctatgagcccaccgatgacgtggagcag
gccgacctgattctgttcaacacctgctcggtgcgtgagaaggcacaagaaaaagtgttc
agcgacctgggccgtatcaagcacctcaaggccaagggcgtgcaaatcggcgtgggcggc
tgcgtggccagccaagaaggcgctgaaatcatcaagcgcgcaccttatgtggacgtggtg
ttcggcccgcaaaccctgcaccgcctgccagaaatgctgaatgcccgcaaagcgctggac
aagccgcaggtggacattagcttcccagagatcgaaaagtttgaccatctgccgcctgcc
aaggtggaaggtgccagtgcgttcgtgagcatcatggaaggctgctccaaatactgcagc
tactgcgtggtgccctacacccgaggtaccgaaatcaaccgcccgtttgaagatgtgttg
gtcgaagttgccggcttggccgaccagggcgtgaaagaggtgaacctgctgggccagaac
gtgaatgcctggcgcaacgccatgggtgactcgggcgagatggccgactttgccaccttg
ctggagtacgtgagcgacatcccgggcatcgagcgcatccgctacaccaccagccacccc
aacgagttcacacccagccttattgcggcgtatgaaaaactgcccaaactggtgagtcac
ttgcacctgccggtgcagcacggcagcgacaaaatcttgatggccatgaagcgcggctac
accgccatggaatacaagagcaccatccgcaagctgcgcgccatccggcccgacatgagc
atcagctccgacttcatcgtcggcttccccggcgagacggacgaagaccacgccaagatg
atgaagctgatccacgacatcggctttgacaactccttcagcttcatcttcagcccccgc
cccggcacgccagctgccaacctgcacgacgacacgccgcacgacgtaaagctggcccgc
ctgcaagagctgcaagccgccatcaacgccaacatcgcccgcatcagcgagcagcgcctg
ggtacggtgcaacgcattctggtggaaggaagtagcaagcgcgacaacggcgagctcatg
ggccgcaccgagtgcaaccgcgtggtgaactttgccggcaatccacgcttggtggggcag
ttggtggatgtcaccatcactgagacgcgcagctataccttgcgcggcgaggtactgacc
accgagaccgtggcctga
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