Rhodoferax mekongensis: RAN89_06605
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Entry
RAN89_06605 CDS
T10170
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
rmk Rhodoferax mekongensis
Brite
KEGG Orthology (KO) [BR:
rmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmk03021
]
RAN89_06605 (rpoH)
Transcription machinery [BR:
rmk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RAN89_06605 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_3
Motif
Other DBs
NCBI-ProteinID:
WNO06097
LinkDB
All DBs
Position
complement(1347603..1348544)
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AA seq
313 aa
AA seq
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MSALIAAPRTALATANPWSLVPPLGNLDAYISAANRLPMLTLEEEQEYARKFKNENDLEA
AGKLVLSHLRLVVSVARQYLGYGLPHGDLIQEGNVGLMKAVKRFDPDQGVRLVSYALHWI
KAEIHEYILKNWRMVKVATTKAQRKLFFNLRSMKQRFKGEDAAADLDTHRDTLNTEQVNT
MARELNVKPEEVLEMEARLAGGDVLLDPTPSDDGEDAFGPIAYLTDTNHEPVAMIEARQR
DVLATDGIATALASLDERSRRIVEERWLKVNDDNSGGMTLHDLAAEYGVSAERIRQIEVA
AMKKMKAALAAYA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcattgattgctgccccccgcaccgccctggccaccgccaatccgtggtctttg
gtgccgccactggggaatctggacgcctatatttctgctgccaaccggctgcccatgctt
acgcttgaagaagagcaggaatatgcacgcaaattcaaaaacgagaacgatcttgaagct
gccggtaagttagtgctctctcacttacgtttggtcgtgtcagtggcccgccagtacctc
ggttacggcctgccccacggcgacctgattcaagagggcaacgtgggcctgatgaaggcg
gttaaacgcttcgaccccgaccaaggcgtgcgcttggtgagctacgcgctgcactggatc
aaggccgaaatccacgaatacatccttaaaaactggcgcatggtgaaggtggcgaccacc
aaagcccagcgcaaactgtttttcaacctgcgctccatgaagcaacgcttcaagggagaa
gacgctgcggctgacttggacacccaccgcgacacgctgaataccgagcaggtgaacacc
atggcccgggaactgaacgtgaagcccgaagaagtactggagatggaagcacgccttgcc
ggtggcgatgtgctgctggaccccactccgtctgatgatggcgaagacgccttcggccct
atcgcttacctgacggataccaatcacgagccggtggcgatgatcgaagcgcgccagcgc
gacgtgttggccaccgacgggattgcgactgccctagccagcctggatgagcgcagccgg
cgtatcgtggaggagcgctggctcaaggtgaatgacgacaactccggcggtatgaccctc
cacgacttggccgccgaatacggcgtaagtgccgagcgcatccgccagatcgaagtcgct
gccatgaagaagatgaaagcagcgttggccgcctacgcctga
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