Rhodoferax mekongensis: RAN89_08455
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Entry
RAN89_08455 CDS
T10170
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
rmk Rhodoferax mekongensis
Pathway
rmk02020
Two-component system
rmk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rmk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RAN89_08455
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RAN89_08455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rmk03000
]
RAN89_08455
Transcription factors [BR:
rmk03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
RAN89_08455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
HTH_Cmi2_C
HTH_24
MarR
TrmB
Cupin_2
HTH_28
HTH_29
MarR_2
GntR
7TMR-HDED
Motif
Other DBs
NCBI-ProteinID:
WNO06443
LinkDB
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Position
1733887..1734561
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AA seq
224 aa
AA seq
DB search
MAMLSNQDLIRRVPLFANLTQEQIDDLAANVTKRKIKKGEDVVRQGHNSNALFLILSGRA
HVVMTDSKGKEVILATLKAGDYIGEMSLIDNEAHSATVQAETQMDVLVLGREDFTRCVTN
NAAIAGAVMRGLVQRLRTADQKIVSLALMGVYGRVANVLLDMAEPIDKGEMLIREKVSRS
DLSKMVGASREMVSRVMKDFEDQGFIKTNKDGGIRVWERRSKPR
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgttgagcaaccaggatttgattcgacgggtgccccttttcgccaatttgacc
caggaacagattgacgatctggcggcgaatgtcaccaaacgcaagatcaaaaaaggggag
gacgttgtccggcaagggcataactccaacgcgctgtttttgatactttccggccgggcg
catgtggtgatgaccgacagcaagggcaaagaagtcattctggcgaccctgaaggcaggg
gactacatcggtgagatgagcttgattgacaacgaggcccattcagccacggttcaggca
gagacccagatggatgtgctggtgttggggcgcgaagatttcacccgttgtgtcaccaac
aatgcggccatcgccggcgctgtgatgcgcggcttggtgcaacgcttgcgcacagcggac
cagaagattgtgtcgcttgcactgatgggggtgtatggccgcgtcgccaacgtcctgttg
gacatggcggaacccatcgacaaaggtgaaatgctgatccgagagaaagtgtcccgttca
gacctgtccaaaatggtcggggcctcacgtgaaatggtgagtcgcgtgatgaaagacttc
gaagaccaaggcttcatcaaaaccaacaaagatggcggtatccgggtctgggagcgtcgc
tccaagccacggtga
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