Rhodoferax mekongensis: RAN89_09075
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Entry
RAN89_09075 CDS
T10170
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rmk Rhodoferax mekongensis
Pathway
rmk00020
Citrate cycle (TCA cycle)
rmk00190
Oxidative phosphorylation
rmk00650
Butanoate metabolism
rmk00720
Other carbon fixation pathways
rmk01100
Metabolic pathways
rmk01110
Biosynthesis of secondary metabolites
rmk01120
Microbial metabolism in diverse environments
rmk01200
Carbon metabolism
Module
rmk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rmk_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rmk_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rmk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RAN89_09075 (sdhA)
00650 Butanoate metabolism
RAN89_09075 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
RAN89_09075 (sdhA)
00720 Other carbon fixation pathways
RAN89_09075 (sdhA)
Enzymes [BR:
rmk01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RAN89_09075 (sdhA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
HI0933_like
Thi4
FAD_binding_3
Pyr_redox_2
GIDA
FAD_oxidored
Pyr_redox_3
NAD_binding_7
ThiF
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
WNO06561
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All DBs
Position
complement(1866938..1868728)
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AA seq
596 aa
AA seq
DB search
MSYSVSKRKFDVVIVGAGGSGMRASLQLARAGLNVAVLSKVFPTRSHTVAAQGGIGASLG
NMNDDNWHYHFYDTVKGSDWLGDQDAIEFMCREAPKVVYDLEHMGMPFDRNPDGTIYQRP
FGGHTANYGEKAVERACAAADRTGHAMLHTLYQQNVAAKTSFFVEWMALDLIRDAEGDVV
GVTALEMETGDIHILEAKTTLLATGGAGRIFAASTNAFINTGDGLGMAARAGIPLEDMEF
WQFHPTGVAGAGVLLTEGCRGEGAILLNSNGERFMERYAPTLKDLAPRDFVSRSMDQEIK
EGRGCGPNKDYVLLKLDHLGAETIHKRLPSVYEIGVNFANVDITKEPIPVVPTIHYQMGG
IPTNVNGQVVVQNGDVHNQVVNGLYAVGECSCVSVHGANRLGTNSLLDLLVFGRAAGNHI
VNYIKGSKEHKPLPKDAADRTLERVSRLDKATSGEYAQDVANDLRASMQQHAGVFRTQKS
MDEGVVKIAELRERVKALNLKDKSKVFNTARIEALEVENLIEAAQATIVSAAARHESRGA
HTVDDYGDTPEHPNGRNDQDWHKHTLWYSEGNRLSYKPVQMKPLTVDSVPLKVRTF
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtcttactccgtctctaaacgcaaattcgacgtcgtgatcgtcggcgccggtggctcc
ggcatgcgcgcttccctgcagctggcacgtgccggactgaatgtggccgttctgtccaaa
gtgttccccacccgctcccacaccgtggcagcacaaggcggcatcggtgcctccttgggc
aacatgaacgacgacaactggcactaccacttctatgacaccgtcaagggctccgactgg
ctcggcgaccaggacgctatcgagttcatgtgccgtgaagctcccaaggtggtgtacgac
ctggagcacatgggtatgcctttcgaccgcaaccctgacggcaccatttaccagcgcccc
ttcggcggccacaccgccaactacggtgaaaaagctgtggaacgcgcttgcgctgccgct
gaccgtaccggtcacgccatgttgcacacgctgtaccagcagaacgtggcagccaagacc
agcttcttcgtggagtggatggcactggacctgatccgtgacgccgaaggcgacgtggtc
ggtgtcaccgccctggaaatggaaaccggcgatatccacattctggaagccaagaccacc
ctgctggccaccggtggcgcaggtcgtatcttcgcagcctccaccaacgccttcatcaac
accggtgacggccttggcatggcagcgcgtgctggcataccgttggaagacatggagttc
tggcagttccaccccaccggcgtggctggtgccggcgtgttgctgaccgaaggttgccgc
ggcgaaggcgctattctgctcaacagcaacggcgaacgtttcatggagcgctatgcgcct
accctcaaagacttggctccgcgtgacttcgtgtcccgctccatggaccaggaaatcaag
gaaggccgtggctgcggtccgaacaaggactatgtgctcttgaagctggaccacttgggt
gcagaaaccatccacaagcgcctgccatcggtgtatgaaatcggcgtgaacttcgccaac
gtggacatcaccaaagaacctatccccgtggtgcccaccatccactaccagatgggtggt
attcccaccaacgtcaatggccaggtggtggtgcaaaacggcgacgtgcacaaccaggtg
gtcaacggtttgtacgccgtaggcgaatgctcctgcgtatccgtgcacggcgccaaccgc
ctgggcaccaactccctgctggacctgctggtgttcggtcgtgcagcaggcaaccacatc
gtcaactacatcaaaggcagcaaggagcacaagcctctgcccaaggacgctgcagaccgc
acgttggaacgcgtttcccgcttggacaaggccaccagcggtgagtacgcccaggacgtt
gctaacgacctgcgcgcttccatgcagcaacacgctggcgtgttccgtacccagaagagc
atggacgaaggcgtggtcaagattgccgagctgcgcgagcgtgtcaaggcgctcaacctc
aaggacaagtccaaggttttcaacactgcacgcatcgaagcgctggaagtcgaaaatctg
atcgaagccgcacaggccaccatcgtgtcggcagcggcccgtcacgagagccgtggtgcc
cacacggtggacgactacggcgacacgcctgaacaccccaatggccgtaacgaccaagac
tggcacaaacacaccctgtggtacagcgagggcaaccgcctgagctacaagcccgtgcag
atgaagcctttgaccgtggactccgtgccactcaaagtccgtactttctaa
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