Rhodoferax mekongensis: RAN89_09180
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Entry
RAN89_09180 CDS
T10170
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
rmk Rhodoferax mekongensis
Pathway
rmk03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rmk00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
RAN89_09180 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmk03019
]
RAN89_09180 (orn)
03009 Ribosome biogenesis [BR:
rmk03009
]
RAN89_09180 (orn)
Messenger RNA biogenesis [BR:
rmk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RAN89_09180 (orn)
Ribosome biogenesis [BR:
rmk03009
]
Eukaryotic type
Pre-60S particles
RNases
RAN89_09180 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
WNO06582
LinkDB
All DBs
Position
1885416..1885997
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AA seq
193 aa
AA seq
DB search
MAEQNSPIAPVLIKSDKNLVWLDCEMTGLEPEVDRLLEIAVIVTDPHLGQRVEGPVFVIH
QSDAQLDKMDAWNKGTHGKSGLIDKVKASTVTEADAEAALIAFLSQYVPAGASPMCGNTI
GQDRRFLVKYMPKLEAFFHYRNLDVSTLKELAKRWKPEVADAFKKQQKHTALADVNESIE
ELSHYREHFLKIN
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacaaaactcccccatcgcgcccgtgctcatcaaatctgacaaaaacttggtt
tggttggactgtgaaatgaccggtctggagcccgaggtcgaccgtctgctggaaatcgct
gtcatcgtgaccgacccgcacctcggtcagcgggtcgagggcccggtgttcgtcattcat
cagtccgatgcccagctcgacaaaatggatgcttggaacaagggcacccacgggaagagt
ggtctgattgacaaggtcaaggcatccaccgtcacggaagccgatgcagaggcggcgttg
atcgcgtttctgtcgcaatacgtgcccgcaggtgcttcgcccatgtgtggcaacaccatc
ggtcaggaccggcgctttctggtcaagtacatgccgaagttggaggccttcttccattac
cggaacctggatgtgagcaccctcaaagagctggccaagcgatggaagcctgaggtggcg
gacgcgttcaaaaagcaacaaaagcacacggctttggccgacgtgaacgagtccatcgaa
gagctatcacactaccgtgagcattttctcaaaataaattag
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