KEGG   Rhodoferax mekongensis: RAN89_09240
Entry
RAN89_09240       CDS       T10170                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
rmk  Rhodoferax mekongensis
Pathway
rmk03030  DNA replication
rmk03410  Base excision repair
rmk03420  Nucleotide excision repair
rmk03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rmk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RAN89_09240 (polA)
   03410 Base excision repair
    RAN89_09240 (polA)
   03420 Nucleotide excision repair
    RAN89_09240 (polA)
   03440 Homologous recombination
    RAN89_09240 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rmk03032]
    RAN89_09240 (polA)
   03400 DNA repair and recombination proteins [BR:rmk03400]
    RAN89_09240 (polA)
Enzymes [BR:rmk01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RAN89_09240 (polA)
DNA replication proteins [BR:rmk03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     RAN89_09240 (polA)
DNA repair and recombination proteins [BR:rmk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     RAN89_09240 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     RAN89_09240 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 Obc1_cap SSO1393-like_WHD
Other DBs
NCBI-ProteinID: WNO06594
LinkDB
Position
1900696..1903491
AA seq 931 aa
MTESKKTLLLVDGSSYLYRAFFAGGDNMSVTLPDGTVQKTGAVRIMINMMNSLRKEYPAD
YVACVFDAKGPTFRDEIYPEYKAHRDPMPDDLRSQIAPIHEIVRLLGWKVLDVPGVEADD
VIGTLAATAASQGIEVIVSSGNKDLAQLVNEHITIIDTMNGKRRDLAGVEAEFGVPARLM
LDYQTLVGDTVDNVPGVAKVGPKTAVKWLQQYGSLQGVVDNAASIGGVVGENLRKALDWL
PTGRTLLTIKTDCDLTGWVDGLPAMDSIAAGAQDTGALRAFYEKYGFKGLAKSVGGAETA
ATAAAPSARTSEPGLFDEPAGDAAAPASRVSTVEYETIFSFEALDALMARIQAAPLTALD
TETTSLDEMRAEIVGISFSTEPGKGAYIPVAHRYPGAPEQLDRDAVLAKLKPWLESSDAK
KLGQHIKYDRHVFANHGIEVQGYVHDTMLQSYVLEADKQHGLASLAERHLGRSGISFEDL
CGKGANQISFDQVDIVKAAEYACEDSDQTLDVHLALWPQIEANDKLKFIYELEIASSEAL
YRIERNGVLIDAPTLAAQSHELGQRILQLETEAYEIAGQPFNLSSPKQLGEIFFDKLGMP
VVKKTATGARSTDEEVLEKLAEDYPLPAKLLEHRSLAKLKGTYTDKLAQLALPRTGRVHT
HYAQAVAVTGRLSSNDPNLQNIPIRTAEGRRVREAFVAAPGCVIASADYSQIELRIMAHI
SDDPALLRAFHDGLDVHRATAAEVFGVPVDQVSSEQRRYAKVINFGLIYGMSAFGLARNL
GIDNTAAKNYIQRYFERYPGVKAYMESTRELAKRQGYVETVFGRRLQLAGIKNAKGAQLA
GLERAAINAPMQGTAADLIKLSMVKVQQVLDAQNKSTKMIMQVHDELVFEVPDNEVDWLK
VEIPRLMAGVAELKVPLLAEVGVGPNWDKAH
NT seq 2796 nt   +upstreamnt  +downstreamnt
atgaccgaatctaagaaaaccctgctactggtagatggctccagctatttgtatcgcgcc
ttttttgccggcggggacaacatgagcgtgacgctgccggacggcaccgtccagaaaacc
ggtgcggtgcggatcatgatcaacatgatgaacagcctgcgcaaggaatacccggccgac
tatgtggcttgcgtgtttgatgccaaaggcccgaccttccgcgacgagatttaccctgag
tacaaagcccaccgcgacccgatgcccgacgatctgcgcagccagatcgcgcccatccac
gaaatcgtgcgcctgctgggctggaaggtgctggacgtgcccggtgtggaagctgatgac
gtgattggcacgctggcggccaccgccgcctcgcaaggcattgaggtgattgtgagcagc
ggcaacaaggatttggcgcagctggtgaatgagcacatcaccatcattgacaccatgaac
ggcaagcgccgtgatctggccggcgtcgaggccgagttcggcgtgcccgcccgcctgatg
ctggactaccagaccctggtgggtgacacggtggacaacgtgcccggcgtggccaaggtc
ggccccaaaacagcggtgaaatggctgcagcagtacggctcgctgcaaggcgtggtggac
aacgccgccagcatcggcggtgtggtgggcgagaacctgcgcaaagcgctggactggttg
cccaccggtcgcacgctgctgaccatcaagaccgactgcgacctcacgggttgggttgat
ggcttgcctgctatggattcgatagctgctggcgcacaggatacgggcgctctgcgtgct
ttttatgagaaatacggcttcaagggactggcgaagtcggtaggtggcgctgaaactgcg
gctactgctgcggcgccctctgcccgcacatccgagccgggcttgtttgacgagcctgcc
ggtgatgcagctgcgccggcatcgcgcgtgagcacggtggaatacgaaaccatcttttct
ttcgaggcactggacgccctgatggcgcgcatccaggcggctcctctcacggccttggat
accgagacgacttcgctggacgaaatgcgtgccgagattgtgggcatcagcttcagcacc
gagccgggcaaaggcgcctacatcccggtggcgcaccgctatcccggcgcgcccgagcag
ttggaccgcgacgcggtgctggccaaactcaagccgtggctggagagttccgacgccaag
aaactgggccagcacatcaagtacgaccgccatgtgtttgccaaccatggcattgaagtg
cagggttacgtccacgacaccatgctgcaaagctatgtgctcgaagccgacaagcagcac
gggctggccagcctggctgagcgccacttggggcgcagcggcatcagctttgaagacctg
tgcggcaagggtgccaaccaaatcagctttgaccaggtggacattgtcaaagccgccgaa
tacgcctgcgaagactcggaccagacgctggatgtgcatctggcactctggccgcagatc
gaggccaacgacaagctgaagttcatttacgagctggagatcgccagcagcgaagcgctg
taccgcatcgagcgcaacggcgtgctgatcgacgcgcccacgctggcagcgcaaagccat
gagctgggccagcgcatcctgcaactggaaaccgaggcctatgaaattgccggccaaccc
tttaacctgagtagccccaagcagctgggcgaaatcttcttcgacaagctgggcatgccg
gtggtgaagaaaaccgccaccggtgcgcgcagtaccgatgaagaagtgctggagaaactg
gcggaggactatccgctacccgccaaactgctggagcaccgcagccttgccaagctcaag
ggcacctacaccgacaagctggcgcagctggccttgccccgcaccggccgtgtgcacacg
cactacgcgcaagcggtggcagtgaccgggcgcttgagcagcaacgaccccaacctgcaa
aacattccgatccgtaccgctgaaggccgccgcgtgcgcgaagcctttgtggcggctccc
ggctgcgtgattgccagtgccgattacagccagattgaactgcgcatcatggcgcacatc
agcgacgacccggcgcttttgcgcgcttttcacgacgggctggacgtgcaccgcgccacg
gcggcagaagtgtttggtgtgccggtggaccaggtgagcagcgagcaacgccgctatgcc
aaagtcatcaacttcgggctgatctacggcatgagcgccttcggcttggcgcgcaatttg
ggtatcgacaacacggccgccaagaactacatccagcgctactttgagcgctaccccggt
gtaaaggcctacatggagtccacccgggaactggccaagcgccaaggctatgtggaaact
gtgttcggccggcggctgcaattggccggtatcaagaacgccaagggcgcccaattggcg
gggctggagcgtgcggctatcaacgcacccatgcagggcaccgctgcagatttgatcaag
ttgagcatggtcaaagtgcagcaggtgctggatgcgcaaaataagtccaccaagatgatc
atgcaggtgcatgatgaattggtgtttgaggttcccgacaacgaggtggattggctcaag
gtggaaatcccccgcttgatggccggtgtggcagagctcaaggtgcctttgttggccgaa
gtaggggtaggtcccaattgggataaagctcattaa

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