Rhodoferax mekongensis: RAN89_09310
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Entry
RAN89_09310 CDS
T10170
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
rmk Rhodoferax mekongensis
Pathway
rmk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RAN89_09310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmk03400
]
RAN89_09310
Enzymes [BR:
rmk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
RAN89_09310
DNA repair and recombination proteins [BR:
rmk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
RAN89_09310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
CCDC113_CCDC96_CC
Motif
Other DBs
NCBI-ProteinID:
WNO06608
LinkDB
All DBs
Position
1921334..1921579
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AA seq
81 aa
AA seq
DB search
MPKASPSHPDATALPATYEAAMAELEGLVARLESGDLPLDQLLTNYQRGAALLQHCRDKL
QAVEEQIKVLDDGVLKPWKAQ
NT seq
246 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaggccagcccctctcaccccgacgccaccgcgctccccgccacctatgaagcg
gccatggccgaactggaagggctggttgcgcgcctggagtccggcgacctgcccttggac
cagctgctcaccaactaccagcgcggtgccgcgctgttgcagcactgccgcgacaagctg
caggcggtggaagaacagatcaaggtgctggacgacggtgtgttgaaaccttggaaagcc
caatga
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