Rhodoferax mekongensis: RAN89_10160
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Entry
RAN89_10160 CDS
T10170
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
rmk Rhodoferax mekongensis
Brite
KEGG Orthology (KO) [BR:
rmk00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rmk01011
]
RAN89_10160
Enzymes [BR:
rmk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RAN89_10160
Peptidoglycan biosynthesis and degradation proteins [BR:
rmk01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RAN89_10160
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Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
Motif
Other DBs
NCBI-ProteinID:
WNO03299
UniProt:
A0ABZ0AUK7
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Position
complement(2098396..2100096)
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AA seq
566 aa
AA seq
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MNLFHIATAGLLVLLTGCAGTMNSPMPAENTPPGVATTSPNATAAKPAVTDADSLNLRPS
REIARPKPVPPSATTARGESVPLTAIEMAQGSRNVAAIAPPADLWERIRRGYAMNDLEND
LVRDREQWYSSRPDYIFRMTERSKKYLFHIVEELEVRNMPTELALLPFIESAFNPQAVSS
AKAAGMWQFMPATGKYFELKQNTFRDDRRDVLASTRAALDYLQKLYRMFGDWHLALAAYN
WGEGSVSRAIAKNSKAGLPTSYNDLNMPMETRFYVPKLQAVKNIVSNPGKYSSKLPLIEN
HPYFQSVTIRRDIDVALAAKLAEVGLDDFKALNPSLNRPVILAAGTPQILLPWDNAEVFQ
SNLESYSGRLASWTAWVVPTTMRPAEVAKKVGMSEADLRSMNNIPPRVVVRAGSTLLVPR
SNHMPDVTEKVADNSQLSLAPEVVLKRSTVKAGRGETVASIARKYKTTAANVAEWNKVST
SAGFKPGQTVVLFLPAHAKVAASSSPKTGGTAKSASTAKGKAAKDSQAKSKSGGTKAEGK
TSKSGSKSAASGKTEKHAKESKKKEK
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgaatctatttcacattgccaccgcaggtctgctggtgctgttgaccggctgtgcgggg
accatgaattccccgatgccggcagagaacacaccgcccggagtcgccaccaccagcccc
aacgctacggctgccaagcctgcggtcaccgacgccgacagtttgaacctgcgccccagc
cgtgaaatagcgcggcccaaacctgtgccaccgtcagccaccacagcgcgcggggaatcc
gtgccactgaccgccattgaaatggcccagggctcccgcaatgtggcggccattgcgcca
cctgctgatttgtgggagcgcatacggcgtggttacgccatgaatgatttggaaaacgac
ctggtgcgggaccgcgaacagtggtattcctcacgcccggactacattttccggatgacc
gagcggtccaaaaagtacctattccacattgttgaggagctggaggtacgcaacatgccc
accgaactggccctgctgcccttcattgaaagtgcgttcaacccgcaggcagtttccagt
gccaaagcagcgggcatgtggcagttcatgcctgctaccggcaagtatttcgaactcaaa
caaaacacattcagggacgatcgacgcgatgtgctggcctccacgcgcgcggccctcgac
tacctgcaaaagctttacagaatgttcggagactggcatctcgcactcgcggcttacaac
tggggcgagggaagtgtgtctcgcgcaattgccaagaactccaaggcgggactccccacc
agctacaacgacttgaacatgccgatggagacgcgtttttacgtgcccaagctgcaagcc
gtgaaaaacatcgtgtccaacccgggcaagtacagctcgaagctgccgctgattgaaaac
cacccttacttccaaagcgtcacgatccggcgcgatatagacgtggctctggccgccaaa
ctggccgaagtgggcttggacgatttcaaggcgctgaatccgtccctcaaccggcccgtg
atcctggccgccgggacacctcaaattttgttgccatgggacaacgcagaggtattccag
tccaacctcgagagctatagcggtcgtttggccagctggacggcatgggtggtgcccacc
accatgcgaccggcagaggtcgccaaaaaggtagggatgagtgaagcggacttgcgcagc
atgaacaacatccctccccgcgtggtagtgcgcgctggttcgacattgttggttccccgc
agtaaccacatgccggacgttaccgagaaagtggcagacaacagccagctctccttggcg
cctgaagtggtgctcaagcgcagcacggtgaaagctggacgtggcgagacggtcgccagc
atcgcccgcaaatacaagactacggccgccaacgtggcggagtggaacaaagtcagcacc
tctgccggattcaagcccgggcagaccgtggtgctttttctcccggcccacgccaaagtc
gcagcatcgtcaagcccgaagactggcgggacagccaagtctgccagcacggccaaaggc
aaagctgcaaaggacagtcaggccaaaagcaaatccggcggcaccaaagccgaaggcaaa
acgagcaaatccggcagtaaatccgcagcctccggaaaaaccgagaagcacgccaaagag
agcaaaaagaaagagaaataa
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