Rhodoferax mekongensis: RAN89_10835
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Entry
RAN89_10835 CDS
T10170
Name
(GenBank) PilC/PilY family type IV pilus protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
rmk Rhodoferax mekongensis
Brite
KEGG Orthology (KO) [BR:
rmk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rmk02044
]
RAN89_10835
02035 Bacterial motility proteins [BR:
rmk02035
]
RAN89_10835
Secretion system [BR:
rmk02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
RAN89_10835
Bacterial motility proteins [BR:
rmk02035
]
Pilus system
Pilus assembly proteins
RAN89_10835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
FG-GAP_3
Motif
Other DBs
NCBI-ProteinID:
WNO03422
LinkDB
All DBs
Position
complement(2239315..2243976)
Genome browser
AA seq
1553 aa
AA seq
DB search
MFTRTFNHAIASVLLLVSSHSAFAGPVQISSPQAAVPPNITTSSNRPMVMLTTSKDHTLF
GPIYTDFEDLDGDGVLDTDFKPSFKYYGYFDPTKCYSYSTSDERFNPATNADYVNTARTN
PSTGATETLYRWTCPSNQNYWSGNFLNWSSMSRLDVVRKMLYGGRRSTDTSSLTVLERVY
LNFDAHSYTKYYRGTDIRDYTPFSTTALTKAGSGPNAGVYAGLTVCNTGATDSPTGKPIM
RMAVGNYRLWGTVEHEVCRFRDVANDADAKFTAKLARYYKDADKGGGGIAHEIQTPHSVD
DAAKYGSNIGPELTMRVKVCDPTTDPRDSTKSLIGEERCQAFPPDSTTNFKPYGLFQEFG
FNASGSAARAEFGVITGSYDRNTYAGALRKNMGDFSDEINPSTGVFCHSTSSGCSTTLTD
GRTTGSGSIKAMDNIILYGRTSRSYGGSTIGSLPAWGNPVGEMLIQALKYYSYDGTNPAP
DNPTTTTNDTNTGLPVKSWTDPQSNSNTTRFSQYGNAICRPMYALALSSSALSYDGEDDN
AKNSFANLPNRYLSGNSASSKILDDFTDAVGDAELITGTVRSVGRNGTNNDLSCSGKTVG
SLSGVMGVCPEAPAMQGSFKVAGAAYYANTNRVRNYTTLPTDIAYVQDALKVKTLAASLS
GGAARIEVPVPGTNPTKYVYITPESVWGSNIGAPLTFASISSSSTHGAFIVTWNDALLGG
DYDMDLTGFLRYDIVADSASPSGYSIKITTDVPSTCSGAGGTHGFSIIGGRIPGQTTGDG
RYLTHQHYKTDKFSGITGNLCADDTYRAANSSSTLNSSTLGYFTFEAKNPDGSTFAGTSP
INAKGACYVNPWTNAARTSAATGSAGYCNVQDVDFKVITTFHMVGAGDAILKDPLWYAAK
YGNFTSSVKGTDGTYSNVYLPTDTASWDKLKSDGTPGADGIPDGYYLARRPDLLEAQLRK
ALDDLAKNSNAAPAVSSAQLQSDGFKYIAKFDSTAVEGNIEAYQVDSLGYFNNDYTWRAG
QLLATRTSNSTNGDKGESRIIITNYGNKNTSSTSTSASTGGFAFRWASLPDDYKTQMTSA
STNRLSETNASIVVDYMRGDQTKEAASTGLRSRGDNILGPIVNATPAIQERPFASYSGNL
FPDYSTFVSDNKTRAKLLWVAANDGMLHAFNPTTGAEVFAYVPGVLANRLAEIPLQRGTT
GRTRLNGANFTLDSVETQPTGTVWPYVDGNPFSGDILVTSGSTSTWKTYTFGTLGRGGRA
IYALDTGDISILTSGESNTNPDSIFKWQFTSDDDSDLGYIVYDILNSPFSNQPSPIVKLN
NGKFAILLGNGQKSSNGKSVLFIIYTDGPNSNGTWTGKYKKIVADSGSGNGMSAPTWIDL
DGNGTADIVYAGDLKGNMWKFDLTSASESSWDVAYKSGSTNLPLITAKSGSTALPITTAP
EFAYPPYDGLIITFGTGNAFESGNFPNTAVSQRIYGIWDRPAFATGSRSLPNSDGSTLVA
RTYSRQSNGNVIVTAGGRLIGRRRTAGISVFLEVLKWFCQIPIFRRVFLHSLQ
NT seq
4662 nt
NT seq
+upstream
nt +downstream
nt
atgtttacacgaaccttcaaccacgcgatagccagcgttctactgcttgtctccagccat
agtgcatttgcggggccagtacaaatatcgagccctcaggctgcagtaccacccaatatc
accacaagctcgaaccgacccatggtgatgctcacaacgtccaaagaccatacgcttttt
ggccccatttatacagactttgaagatctggatggagatggcgtgctggacacggacttc
aagccaagtttcaaatactatggttattttgatccgactaaatgctactcgtacagcaca
tctgacgaaagattcaatcctgccaccaatgccgattatgtgaatactgcgcgtacgaac
ccatcgactggtgcaacagaaacactctaccgttggacgtgcccaagtaaccaaaattat
tggagtggcaactttctaaactggtcgtctatgagccgtttggatgttgtgcgtaaaatg
ctttatggaggacggcgatcgactgatacctcatccctcacggtactggagcgggtgtac
ctgaattttgatgcacactcgtataccaagtattacagaggcacagacattcgggattac
acacccttttctacaacagccctcactaaagctggatctggcccgaatgcaggtgtctat
gccggccttaccgtctgtaacaccggtgcaactgacagccccactggaaaacctattatg
cggatggctgtgggtaattaccggctatggggaacagttgagcacgaggtttgtagattc
cgcgatgtagctaatgatgccgacgccaaattcaccgcgaaacttgcccgctactataaa
gatgcagacaaaggtggtgggggcatagcgcatgagatacaaacaccacactccgtcgac
gatgctgccaaatatggttctaacatcgggccggaactcaccatgcgggtcaaagtctgc
gacccgacaacagacccccgcgactcaacaaaatcgctcataggggaagagcgttgccaa
gctttcccgcctgattccaccaccaacttcaagccctatggcttgttccaggagtttgga
tttaatgccagtggtagtgccgcgagagcggagtttggtgttatcacaggtagctacgac
cgcaacacctatgcaggcgcactccgcaagaacatgggtgacttcagtgatgaaatcaac
cccagcaccggggtgttctgccacagcacttcttctggctgtagcacaacattgacagat
gggcggaccactggaagtggttccatcaaggccatggataatattattttgtatggccgc
acaagcaggagttatggtggctccaccattggctcattgccggcatggggtaatcctgtt
ggtgaaatgttgattcaggcgttgaaatattattcgtatgacggtacgaatccggcaccg
gacaatccaaccaccacgaccaatgacaccaacactggtctgccagtaaagagttggact
gacccgcagagtaactccaatacaacccgtttctcgcaatacggcaacgcaatttgtcgg
ccgatgtatgccttggctttatccagtagtgcgctgagctatgacggtgaagatgacaat
gcaaaaaactcttttgccaatttgccaaatcgttatttatctggaaacagtgcaagttca
aaaatacttgatgactttaccgatgctgttggcgatgcggagctgataaccgggacggtg
cgttctgtaggccgcaacggcacaaacaacgatttatcgtgctcaggaaaaactgtgggg
agcttaagcggagttatgggcgtatgcccagaggcacctgcgatgcaaggctcctttaag
gtagcgggggctgcatactatgcaaacaccaaccgcgttagaaactacactaccttgccg
actgatattgcctacgtgcaagacgcattgaaggtaaaaactttggcggcatcgttgtct
ggtggagctgctcgaatagaagtccctgtccccgggaccaaccctacgaaatacgtctat
ataacacccgaaagcgtttgggggtcaaacataggtgcacctttaacttttgcttcgatc
agctccagttcaacccatggtgcatttattgttacgtggaatgatgccctactcggtggc
gactatgacatggaccttaccggttttctccggtatgacattgtggcggactctgcatca
ccgtctggatacagcatcaaaatcaccacagatgtgccttcaacatgctcaggtgcaggt
ggtacacatggtttcagcattattggcggacgcattcctgggcaaacaactggggatggc
agatacttaacacaccagcactataaaactgacaagttctctggcatcaccggcaatctc
tgtgctgacgatacctatagagcagcaaattcaagctctactctaaatagctctactttg
ggatacttcacttttgaagcaaaaaatccagatggatcgacatttgctggaaccagtccc
atcaatgccaaaggtgcttgctatgtgaatccgtggactaacgccgcgagaacctccgca
gcaactggctccgccggctattgcaacgtgcaggacgtagatttcaaggtaattacgacc
ttccacatggtgggcgctggcgacgcgatcttgaaggatccgctttggtatgcagccaag
tacggaaactttacgtccagcgtaaaggggactgatggcacatactccaatgtttatttg
cctaccgacaccgcatcgtgggacaagctcaagtcggatggcacacccggagcggatggg
attcccgatggatattacctggcacgtcgccctgatttactagaggcacagcttagaaaa
gcgcttgatgatctcgcaaaaaactccaacgcggcacctgcggtttcttcggcacaactc
caatctgatggctttaaatacatagcgaaattcgactccactgcggtcgaaggcaatatt
gaggcttatcaggtagacagtttgggttactttaataacgattacacatggcgtgcgggt
caactactggcaaccaggaccagcaactcgactaacggagataagggcgaatcccgaatc
attattacgaactatgggaacaaaaacacctcatctacatcaaccagcgcaagtaccggt
ggttttgcgttccgttgggcctcactaccagatgattacaagacccaaatgaccagcgcc
agcacaaataggctgagcgagacaaatgcttcaattgtggttgattacatgcgtggtgac
caaaccaaagaagctgcctctactggtttacgttcgcgtggcgacaacatccttggacct
attgtgaacgctactcccgcgatccaggaacgaccttttgctagttattcaggcaacttg
tttccagactattcgacttttgtaagtgataacaagacacgggcaaagttactctgggtt
gctgcaaatgacggaatgctgcatgctttcaatccaactacaggagcagaggtgtttgct
tatgttccaggtgtactggctaaccgtctggcagagattccgcttcagcgtggtacaacg
gggcggactcggctgaacggcgccaacttcacactcgacagcgtagaaacacaacctacc
ggtaccgtttggccttacgtcgatggaaaccctttctctggtgatatcttagtaactagt
gggagcactagcacttggaaaacctataccttcggcactttaggcagaggtgggcgagca
atatatgcattggatacaggtgatatcagcatcctaacctctggggaatccaataccaat
cctgattctatttttaagtggcagttcacctccgatgatgatagtgaccttggttatatt
gtttatgacatattgaatagtccattctcgaatcaaccatctccgattgttaagttaaac
aacggcaaatttgccatccttcttggtaacggccagaagtcaagcaacggaaaatcggta
ctattcattatttataccgatggcccaaattcgaatggaacatggacaggcaaatacaag
aagattgttgctgacagcggctccggaaatggtatgtcagcgccaacctggattgatttg
gacggaaatggaaccgctgatatcgtttatgccggcgatctaaaaggcaacatgtggaag
tttgatttgaccagcgcctccgaaagcagctgggatgttgcttacaaatcaggttcaacc
aacctccccttgattacggcaaagtcaggatcgacggcacttcctattactacagcccct
gaatttgcgtatccaccttatgatggactcataatcactttcggcacgggcaatgcattc
gaatcaggcaatttcccgaatacagcagtaagccagcgtatatacggaatttgggaccgc
cctgcattcgcaaccggaagtaggtcgttgccgaattcagatgggtctactttggtggcg
cgaacctattcgcgacaaagcaacggtaatgttatcgtgactgccgggggacgattgatt
gggcgacgaaggacggctggtatttcagtcttcctggaagttctgaaatggttttgtcag
atcccgatattcaggcgggtgttcttgcattcactacagtga
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