KEGG   Rhodoferax mekongensis: RAN89_10970
Entry
RAN89_10970       CDS       T10170                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rmk  Rhodoferax mekongensis
Pathway
rmk00010  Glycolysis / Gluconeogenesis
rmk00020  Citrate cycle (TCA cycle)
rmk00260  Glycine, serine and threonine metabolism
rmk00280  Valine, leucine and isoleucine degradation
rmk00310  Lysine degradation
rmk00380  Tryptophan metabolism
rmk00620  Pyruvate metabolism
rmk00630  Glyoxylate and dicarboxylate metabolism
rmk00640  Propanoate metabolism
rmk00670  One carbon pool by folate
rmk00785  Lipoic acid metabolism
rmk01100  Metabolic pathways
rmk01110  Biosynthesis of secondary metabolites
rmk01120  Microbial metabolism in diverse environments
rmk01200  Carbon metabolism
rmk01210  2-Oxocarboxylic acid metabolism
rmk01240  Biosynthesis of cofactors
Module
rmk_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rmk_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rmk_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rmk_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rmk00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    RAN89_10970 (lpdA)
   00020 Citrate cycle (TCA cycle)
    RAN89_10970 (lpdA)
   00620 Pyruvate metabolism
    RAN89_10970 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    RAN89_10970 (lpdA)
   00640 Propanoate metabolism
    RAN89_10970 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RAN89_10970 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    RAN89_10970 (lpdA)
   00310 Lysine degradation
    RAN89_10970 (lpdA)
   00380 Tryptophan metabolism
    RAN89_10970 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    RAN89_10970 (lpdA)
   00670 One carbon pool by folate
    RAN89_10970 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rmk04147]
    RAN89_10970 (lpdA)
Enzymes [BR:rmk01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     RAN89_10970 (lpdA)
Exosome [BR:rmk04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   RAN89_10970 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox FAD_oxidored GIDA FAD_binding_2 Thi4 AlaDh_PNT_C NAD_binding_8 FAD_binding_3 HI0933_like DAO GCV_H Biotin_lipoyl_2 Pyr_redox_3 Lycopene_cycl HlyD_D23
Other DBs
NCBI-ProteinID: WNO03447
LinkDB
Position
2275626..2277461
AA seq 611 aa
MAIVEIKVPDIGDFDEVAVIELLVKVGDTIKPEQSLITVESDKASMEIPSSAGGVVTELK
VKLGDKVKEGSVVVLLEAAGAASEAKPAAAPAASAPAAPVSVAAPAAPAPVASSFGGSAD
LECDVVVIGGGPGGYSAAFRAADLGLKVIVVERYATLGGVCLNVGCIPSKALLHVAAVMD
EVSHMADLGVDFGAPVVNIDKLRGHKEKVIGKLTGGLAAMAKMRKVTTVRGYGNFVGANH
LEVEETSGTAQEKTGTKKVIAFKRAIIAAGSQAVRLPFMPNDPRVVDSTGALALKEVPKR
MLILGGGIIGLEMGTVYSTLGARLDVVEMMDGLMQGADRDLVKIWQKMNAKRFDNIMLKT
KTVSARALPEGIEVTFAPAEEGGTAPAPQVYDLVLQAVGRTPNGKKISAEKAGVAVTDRG
FINVDIQMRTNVPHIFAIGDIVGQPMLAHKAVHEAHVAAEVIAGELQGNKELAAAAFNAR
VIPSVAYTDPEVAWVGLTEDQAKAQGIKVKKGLFPWTASGRAIANGRDEGVTKLLFDDSP
EAHGHGKILGGGMVGTHAGDMIGEIALAIEMGADAVDIGKTIHPHPTLGESIGMAAEIAH
GSCTDVPPAKK
NT seq 1836 nt   +upstreamnt  +downstreamnt
atggcaatcgtagaaatcaaggttccggacatcggagacttcgacgaagtcgcggtcatc
gagctgctagtcaaagtcggcgacaccatcaagcctgagcaaagcctgatcaccgtggag
tccgacaaggcctccatggaaattccgtccagcgccggtggtgtggttaccgaactcaaa
gtcaagctgggcgacaaggtcaaagaaggctctgtggtcgtgttgctggaagctgcaggt
gcggcttctgaagcaaaaccggctgcagcgcccgccgcatctgcgccagcagctcctgtt
tctgtagcagccccggcggctccggccccagtggccagcagcttcggcggcagtgccgat
ctggagtgcgacgtggtcgtcatcggtggcggccccggcggttactccgcggcctttcgc
gcggcagacttgggcctgaaagtcattgtggtggagcgttacgccactctgggtggcgtg
tgcctgaacgtgggttgcattccctccaaagccttgctgcacgtggcggccgtcatggac
gaagtcagccacatggcggacttgggtgtggacttcggtgcgcccgtggtcaacatcgac
aagctgcgcggccacaaagaaaaggtcattggcaagctgaccggcggtttggctgccatg
gccaagatgcgcaaggtcacgaccgtgcgcggctatggcaacttcgtcggtgccaaccac
ctcgaagtggaagaaaccagcggcactgcgcaagagaagaccggtaccaagaaggtcatt
gcctttaagcgcgccatcatcgcggccggctcgcaagccgtgcgtttgccgttcatgcct
aacgacccacgcgtcgtggactccaccggcgccctggcgctcaaggaagtccccaagcgg
atgttgatccttggtggtggcatcatcggcttggagatgggcaccgtttacagcacgctg
ggcgcccgcctggacgtggtggaaatgatggacggtctgatgcaaggcgctgatcgcgac
ctggtcaagatctggcagaagatgaatgccaagcgcttcgacaacatcatgctcaagacc
aagaccgtgtccgcacgcgccttgcctgaaggcattgaggtgacgtttgcgccggcggaa
gagggcggcaccgcccccgcaccgcaggtgtacgacctggtgctccaagccgtgggccgc
acgcccaacggcaagaagatcagcgccgagaaggccggtgttgctgtgacggatcgtggc
ttcatcaacgtcgacatccagatgcgcaccaacgtgccgcacatcttcgctatcggcgac
atcgtgggccagcccatgttggcgcacaaggcggtgcatgaagcccacgtggccgctgaa
gtaatcgccggtgaactgcaaggcaacaaagaattggctgctgcggcgttcaacgcccgc
gtcatccccagcgtggcctacaccgaccccgaagtggcttgggttggcctcaccgaagac
caagccaaggcccaaggcatcaaggtcaagaagggcttgttcccctggaccgcatccggc
cgcgcgattgccaatggccgcgacgaaggcgttaccaaactcctgtttgatgactctccg
gaagcacacggccacggcaagatcctgggcggcggcatggtcggcacgcatgcgggcgac
atgatcggcgagatcgccttggcgattgagatgggcgcagacgcggtggacatcggcaag
accatccacccccaccccacgctgggcgaaagcatcggcatggcggcggagattgcgcac
ggcagctgcacggatgtgccgccggcgaagaagtaa

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