KEGG   Rhodoferax mekongensis: RAN89_11195
Entry
RAN89_11195       CDS       T10170                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rmk  Rhodoferax mekongensis
Pathway
rmk00010  Glycolysis / Gluconeogenesis
rmk00020  Citrate cycle (TCA cycle)
rmk00260  Glycine, serine and threonine metabolism
rmk00280  Valine, leucine and isoleucine degradation
rmk00310  Lysine degradation
rmk00380  Tryptophan metabolism
rmk00620  Pyruvate metabolism
rmk00630  Glyoxylate and dicarboxylate metabolism
rmk00640  Propanoate metabolism
rmk00670  One carbon pool by folate
rmk00785  Lipoic acid metabolism
rmk01100  Metabolic pathways
rmk01110  Biosynthesis of secondary metabolites
rmk01120  Microbial metabolism in diverse environments
rmk01200  Carbon metabolism
rmk01210  2-Oxocarboxylic acid metabolism
rmk01240  Biosynthesis of cofactors
Module
rmk_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rmk_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rmk_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rmk_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rmk00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    RAN89_11195 (lpdA)
   00020 Citrate cycle (TCA cycle)
    RAN89_11195 (lpdA)
   00620 Pyruvate metabolism
    RAN89_11195 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    RAN89_11195 (lpdA)
   00640 Propanoate metabolism
    RAN89_11195 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RAN89_11195 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    RAN89_11195 (lpdA)
   00310 Lysine degradation
    RAN89_11195 (lpdA)
   00380 Tryptophan metabolism
    RAN89_11195 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    RAN89_11195 (lpdA)
   00670 One carbon pool by folate
    RAN89_11195 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rmk04147]
    RAN89_11195 (lpdA)
Enzymes [BR:rmk01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     RAN89_11195 (lpdA)
Exosome [BR:rmk04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   RAN89_11195 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored HI0933_like GIDA FAD_binding_2 AlaDh_PNT_C Pyr_redox_3 NAD_binding_8 Thi4 FAD_binding_3 DAO
Other DBs
NCBI-ProteinID: WNO03488
LinkDB
Position
2331617..2333044
AA seq 475 aa
MSKHFDVIVIGGGPGGYIAAIRAAQLGFNVACIDEWKNAAGGPAPGGTCTNVGCIPSKAL
LQSSEHFNHANHHFAEHGIEVKGVSMDVAKMIARKNTVVKQNNDGILYLFKKNKVAFFHG
RGSFVKAAEGGYEIKVAGATEETITGKQIIIATGSNARALPGTPFDEVNILSNDGALNIG
AVPKKLGLIGSGVIGLEMGSVWKRLGAEVTILEGLPVFLGAVDEGVAKEAHKAFTKQGLK
IELGVKVGEIKNSKKGVSVAYTNAKGEAQTLDVDKLIISIGRVPNTIGLNTEVVGLALDE
RGAIVVDADCKTNLPGVWAVGDVVRGPMLAHKAEEEGVAVAERIAGQHGHVNFNTIPWVI
YTSPEIAWVGRTEQQLKADGVAYKAGQFPFLANGRARALGDTTGFVKFLADATTDEILGV
HIVGPQASELISEAVVAMEFKASAEDIARICHAHPSLSEATKEAALAVDKRTLNF
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgagcaaacattttgacgtgatcgtcattggcggcggccccggtggctacattgctgcc
atccgtgccgcccagctgggcttcaatgtggcctgtatcgacgagtggaagaatgccgct
ggcggccccgctcccggtggtacttgtaccaacgtgggttgcattccttccaaggctttg
ttgcaatcgtccgagcactttaaccacgccaatcaccactttgccgagcacggcattgag
gtcaagggtgtgagcatggatgtggccaagatgattgcccgcaaaaacaccgtggtaaag
caaaacaacgacggtatcttgtacttgttcaaaaagaacaaggtcgccttcttccatggc
cgtggctcgttcgtgaaggctgccgaaggcggctacgagatcaaggtcgcaggtgcaacc
gaggaaacgatcaccggcaagcaaatcatcatcgccaccggttccaatgcccgcgcactg
cccggcacgccttttgatgaagtcaacatcctgtccaacgacggcgctctgaacatcggt
gccgtgcccaagaagctgggcctgatcggttctggcgtaatcggtctggaaatgggttct
gtgtggaagcgtctgggcgccgaggtcaccattctcgaaggcctgcccgtgttcctgggc
gcggtcgatgaaggtgttgccaaggaagcgcacaaggcgttcaccaagcaaggcctgaag
attgagctgggcgtgaaggtcggcgagatcaagaacagcaagaaaggcgtgtccgttgcc
tacaccaacgccaagggcgaagcccagacgctagatgtcgacaagctaatcatctccatt
ggccgcgtgcccaacaccatcggtctgaacaccgaggttgtgggcctggcgctggacgag
cgcggtgcgatcgtggtggatgccgactgcaaaaccaacctgcccggtgtctgggcggtg
ggcgacgtggtgcgcggtcccatgttggcgcacaaggcggaagaagagggcgttgccgtg
gctgagcgcattgccggtcaacacggtcacgtgaacttcaacaccattccttgggtgatt
tacaccagccccgagatcgcatgggtgggtcggaccgagcagcagctcaaggcggatggc
gtggcctacaaggcgggtcagttcccattcctggcgaatggccgcgcacgtgcgctgggc
gacaccaccggtttcgtgaagttcctggccgatgccacgaccgacgaaatcttgggcgtt
catatcgttggtccgcaagcctcggagttgatctccgaagccgttgtggccatggagttc
aaagccagtgcggaagacatcgcccgcatctgtcatgcacacccctccttgagtgaagcc
accaaggaagcagcgttggcagtggacaagcgtacgctgaacttctga

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