Rhodoferax mekongensis: RAN89_11400
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Entry
RAN89_11400 CDS
T10170
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
rmk Rhodoferax mekongensis
Pathway
rmk00071
Fatty acid degradation
rmk00280
Valine, leucine and isoleucine degradation
rmk00310
Lysine degradation
rmk00362
Benzoate degradation
rmk00380
Tryptophan metabolism
rmk00410
beta-Alanine metabolism
rmk00640
Propanoate metabolism
rmk00650
Butanoate metabolism
rmk00907
Pinene, camphor and geraniol degradation
rmk00930
Caprolactam degradation
rmk01100
Metabolic pathways
rmk01110
Biosynthesis of secondary metabolites
rmk01120
Microbial metabolism in diverse environments
rmk01200
Carbon metabolism
rmk01212
Fatty acid metabolism
Module
rmk_M00087
beta-Oxidation
rmk_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
Enzymes [BR:
rmk01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
RAN89_11400
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
RAN89_11400
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
RAN89_11400
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Other DBs
NCBI-ProteinID:
WNO03525
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Position
complement(2370650..2372809)
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AA seq
719 aa
AA seq
DB search
MKTIRYSLDHGIATITFDEPDSPVNTMCLQWQQDMDAVAAQVLHDKDSITGILLASAKST
FFAGADLKAAMRLTPADAPRIFEEIERVKRNFRTIETLGKPVVSLLNGTALGGGWEVALV
GHYRIAVDDRKTQFGLPEVTLGLLPGASGVTKMTRHLGLMGAQPYLVEGKTFNPYEAKGL
GLVHELVAPGPDATAEMRAKALAWVAANPTAQHPWEAKGYKVPGGLPSSPAVAAMLPIAP
AVIKKNTRGLYPAPEAIIACMVEGLQVDLDTALRIESRYLAKLMSGSQAKAMINTFFFNL
NAIKSGQSRPAGVPRFKPAKVGLLGAGMMGAGIAYSQASKGITTVLKDVSQEKADLGKSY
SAKITQGRVDKGRMKPEAQQQILDLIHPTGSVADLQGCDLIIEAVFENRELKAKVTQESE
PLLAPGGFFASNTSTLPITGLAKASTKPEKFIGIHFFSPVDKMKLVEIIKGKATDDETVA
RAFDYVQALGKFPIVVNDSRGFFTSRVFGTFVMEGAAMLGEGIPAAAIENAGIQAGMPVG
PLAVLDETALTLSLHVMDQTQKDFEAEGKTYIATPGELVVEKMVKQHNRPGRAGGAGFYE
YPSEKGAKKFLWPELKGLFEKSDVAWDITDLKDRLLYRQAIETARCLAEGVLTSVHDANI
GSIFGIGFPAWTGGAMQFIYGMGIDTFEARAAALATQFGGGFALSDDVKSAIRRFQPMY
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccatccgctactccctggaccacggtatcgccaccatcacctttgatgagccg
gactcccccgtcaacaccatgtgcctgcaatggcagcaggacatggatgccgtggccgcc
caggtgctgcatgacaaagacagcatcaccggcatcctgctggcgtctgccaaaagcacc
ttcttcgccggcgcggacctcaaagcggccatgcgactgaccccggcggatgcaccgcgc
atctttgaagaaatcgagcgggtgaagcgcaacttccgcaccattgagaccctgggcaaa
ccggtggtcagcctgctcaacggcacggccttgggtggcggctgggaggttgcgctggtg
ggccactaccgcatcgcagtggacgaccgaaaaacccagttcggcctgcccgaagtcacc
ctgggcctgctgccgggtgccagtggcgtgaccaagatgacgcgtcacctggggctgatg
ggcgcccagccttatctggtggaaggcaaaaccttcaacccctatgaggctaaagggctc
gggctggtgcacgagctggtagcgcccggccccgacgccacagccgagatgcgcgccaag
gcgttggcatgggttgccgccaacccgacagcccaacacccttgggaagccaaaggctac
aaagtgccgggcggcctgcccagcagccccgcggtggcagccatgttgccgattgcgccc
gcagtcatcaagaaaaacacccggggcctgtaccccgcgcccgaggccatcatcgcctgc
atggtcgaaggcttgcaggtggacctcgacaccgcgctgcgcattgaaagccggtacctg
gccaagctcatgtccggctcacaggccaaggccatgatcaacaccttcttcttcaacctg
aacgccatcaagagcggccagagccgcccggctggcgtgccccgcttcaagcctgccaaa
gtaggcctgttgggcgccggcatgatgggcgcgggcattgcctacagccaggccagcaaa
ggcatcaccaccgtgctcaaggacgtgagccaggaaaaagcagacctcggcaagagctac
agcgccaagatcacccaaggccgtgtcgacaagggccgcatgaagcccgaggcccagcaa
cagatcctcgacctgatccaccccaccggcagcgtggcagacctgcaaggctgcgacttg
atcatcgaggccgtatttgagaaccgcgaactcaaagccaaggtcacccaagagtccgag
ccgctcttggcaccgggtggtttctttgcgtccaacacgtccaccttgccgattaccggt
ctggccaaagcgagcaccaaacccgaaaaattcatcggcatccacttcttcagcccggtc
gacaagatgaagctggtcgaaatcatcaaaggcaaagccacggacgatgagactgtggcc
cgcgcttttgactatgtgcaggcactgggcaaatttcccatcgtggtgaacgattcgcgc
ggctttttcaccagccgcgtgttcggcacctttgtgatggaaggtgcagccatgctgggc
gaaggcattcccgccgcggcaattgagaacgcaggcatccaagccggcatgccggtgggc
ccattggccgtgctggacgaaacggcgctgaccttgagcctgcacgtgatggaccagacc
caaaaggactttgaggccgagggcaagacctatatcgccacacccggtgaactcgtagtc
gagaaaatggtgaagcagcacaaccgccccggtcgcgccggtggtgcgggcttttacgaa
tacccctctgagaaaggtgccaagaagttcctctggcccgaactcaaaggcctgttcgaa
aagtccgatgtcgcttgggacatcaccgacctcaaagatcgcctgctctaccgccaagcg
atagaaacagcgcgctgcctggccgagggcgttctcaccagcgtgcacgatgccaacatc
ggctcgatcttcggcatcggcttcccggcgtggaccggtggcgccatgcagttcatctac
ggcatgggcatcgacacgtttgaggctcgggcggccgctttggccacacaattcggaggc
ggttttgccttgagcgatgatgtgaaatccgccatacggcgctttcaacccatgtactga
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