Rhodoferax mekongensis: RAN89_12195
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Entry
RAN89_12195 CDS
T10170
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
rmk Rhodoferax mekongensis
Pathway
rmk00071
Fatty acid degradation
rmk00362
Benzoate degradation
rmk00650
Butanoate metabolism
rmk01100
Metabolic pathways
rmk01120
Microbial metabolism in diverse environments
rmk01200
Carbon metabolism
rmk01212
Fatty acid metabolism
Module
rmk_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
rmk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
RAN89_12195
09103 Lipid metabolism
00071 Fatty acid degradation
RAN89_12195
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RAN89_12195
Enzymes [BR:
rmk01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
RAN89_12195
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GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
NAD_binding_2
F420_oxidored
NAD_Gly3P_dh_N
Pyr_redox_2
Pyr_redox
DUF924
ApbA
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
WNO03676
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All DBs
Position
complement(2540451..2542550)
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AA seq
699 aa
AA seq
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MTAQYQVHGDIAVITLNNPPVNGLGLSTRQGIADGMAQAHADAAVKAIVITGAGKAFSGG
ADITEFGSPKALQEPNLISVIKVLENSAKPVVAAIHTVAMGGGLELALGCHYRIAAPGTS
IALPEVKLGLVPGAGGTQRLPRVLGVEPALNMIVSGEPVKSEMLAMLPGQKLFDKLSASA
ESLAEEALAFARSVADVRPLPLVRDLKCKHPQGDAYFQFARNMVKGMSKNFPAPAKCVDV
VEAATKKKFDEGMLVEREAFINLMFTAESKSLRHLFLAERAASKIADVPSDTAQRAINSV
AVIGAGTMGGGIAMNFLNAGIPVKMLEMKQEALDRGIATIRKNYEAQVAKKKLKQDKYEQ
RMSLLTTTLSYDDLTGTDMVIEAVFEELGVKEAVFKELDRVMKPGAILASNTSTLDVNKI
ANFTQRPEDVVGLHFFSPANVMKLLEVVRGEKTAKDVMATVMSVAKKIKKTAVVSGVCDG
FIGNRMIEQYGRQGGFLLDEGCTPEQVDKAMEKFGMAMGPFRMGDLAGNDIGWAIRKRRY
LEKPHMKYSKTADLLCEKGRFGQKTGAGWYDYVPGKREAIPNAEVVAMIEEHRKALGITP
RKISDEEIVQRLVFSLVNEAAHILEEGIAAKASDIDIVYIFGYGFPAHRGGPMNYADEVG
LFNVVQAMNRFAQNPLDDAKFWQPAPLLAKLAAEGKTFN
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcccagtaccaagtccatggcgatatcgccgtcatcaccctgaacaacccaccg
gtcaacggtttgggcctttccacccgccagggaattgcagacggcatggcccaggctcat
gccgatgcggcggtcaaagccattgtgatcaccggcgccggcaaggcgttttccggcggt
gcggacatcacggaattcggcagccccaaggccctgcaagaacccaacctgatcagcgtg
atcaaggtgctggagaactctgccaaaccggtcgtcgcagccatccacaccgtggccatg
ggcggtggtttggagttggcattgggttgccactaccgcattgcagcgcccggcaccagc
attgcattgccggaggtcaaactcggcctggtacccggtgccggcggtacccagcgcctg
ccacgcgtgctgggcgtagagcccgcactcaacatgattgtcagcggcgagcccgtcaag
agcgaaatgctcgccatgctgcctggccagaagctcttcgacaagctgtctgcttccgcc
gaaagcctggctgaagaagccctggccttcgcccgctcggtggcggatgtgcgccccttg
ccactcgtgcgcgacctgaagtgcaagcatccgcaaggcgatgcttatttccagttcgcc
cgcaacatggtcaagggcatgagcaaaaatttcccggcacctgccaagtgcgtggatgtg
gtggaagccgctaccaagaagaaatttgacgaaggcatgctggtcgagcgcgaggcgttc
atcaacctgatgttcactgcggagagcaagtccctgcgccacctgttcctggcggagcgt
gcagcatcaaaaatcgcggatgtgccctcggatacagcgcaacgcgctatcaactcggta
gcagtgatcggcgcaggcactatgggtggcggcattgccatgaacttcctgaacgccggc
atccccgtcaagatgctggaaatgaagcaagaagctttggaccgcggcattgccaccatc
cgcaagaactacgaagcccaagtggccaagaaaaagctcaagcaagacaagtacgagcag
cgcatgagcctgctgactactaccctgagctacgatgacctcaccggtactgacatggtg
atcgaggcggtgtttgaagagctgggcgtcaaggaagccgtgttcaaggaactggaccgc
gtgatgaagcccggtgccatcctcgcctccaacacctcgaccttggacgtcaacaaaatc
gccaacttcacccaacgccctgaggacgtagtgggcctgcatttcttcagccctgccaac
gtgatgaagctgctggaagtagtgcgtggcgaaaagaccgccaaagacgtcatggcgacc
gtcatgtcggtcgcaaagaagatcaaaaagaccgctgtggtgtccggtgtgtgcgacggt
ttcatcggcaaccgcatgatcgagcagtacggccgccagggcggttttctgctggatgaa
ggctgcacccccgagcaggtggacaaggccatggaaaaatttggcatggccatgggcccc
ttccgcatgggcgatctggcgggcaacgacatcggctgggccattcgcaagcgccgctat
cttgagaagccgcacatgaagtacagcaaaacggctgacttgctgtgcgaaaaaggccgc
ttcggccagaagaccggcgcaggctggtacgactatgtgcccggtaagcgcgaggccatc
ccgaacgccgaagtagtggccatgattgaagagcaccgcaaggcgctgggcattacaccc
cgcaagatctcggacgaagaaatcgtgcagcgcttggtgttcagcctggtcaacgaggcc
gcccacattctggaagagggcatcgccgccaaggccagtgatatcgacatcgtttacatc
ttcggctacggcttccccgcccaccgcggtggccccatgaactacgccgacgaagtcggc
ctgttcaatgtggtgcaagccatgaaccgctttgcccagaacccgctggacgatgccaaa
ttctggcaacccgctcctttgttggccaagctggccgctgaaggcaaaaccttcaactga
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