Rhodoferax mekongensis: RAN89_12520
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Entry
RAN89_12520 CDS
T10170
Symbol
purD
Name
(GenBank) phosphoribosylamine--glycine ligase
KO
K01945
phosphoribosylamine---glycine ligase [EC:
6.3.4.13
]
Organism
rmk Rhodoferax mekongensis
Pathway
rmk00230
Purine metabolism
rmk01100
Metabolic pathways
rmk01110
Biosynthesis of secondary metabolites
Module
rmk_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
rmk00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
RAN89_12520 (purD)
Enzymes [BR:
rmk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
RAN89_12520 (purD)
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GFIT
Motif
Pfam:
GARS_A
GARS_N
GARS_C
ATP-grasp
ATP-grasp_3
RimK
ATP-grasp_2
ATP-grasp_5
LAL_C2
CPSase_L_D2
ATP-grasp_4
Dala_Dala_lig_C
Motif
Other DBs
NCBI-ProteinID:
WNO03738
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Position
complement(2611575..2612867)
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AA seq
430 aa
AA seq
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MNVLVIGGGGREHALAWKLAQSPKVQMVYVAPGNGGTATDPRLKNVPITDVVQLRQWAQD
NKITLTLVGPEVPLAAGVVDEFRAHNMRIFGPTKAAAQLESSKAFSKAFMRRHGIPTAEY
ATFSDPVAAHAYVDKMGAPTVVKADGLAAGKGVVVAMTVAEAHEAIDFMLVDNTLGVAHN
DGGARVVIEEFLEGEEASFIVMVDGKNVLPLATSQDHKRLQDGDQGPNTGGMGAYSPAPV
VTPDVHAKAMREIILPTVKGMEADGIPFSGFLYAGLMIDKNGQPKTLEFNCRMGDPETQP
IMMRLKTDLVDVLMAATEPGPHGKLDEVELQWDRRTALGVVLAAHGYPMNPRKGDAITGI
PKESEDAAVFHAGTTLQDGTVLTSGGRVLCVTALADSVKQAQQRAYQVIDEIQFDGMQFR
RDIGYRAVKG
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtactcgtaattggcggcggtggccgtgaacatgcgctggcctggaaactggcc
cagtcccccaaggtgcagatggtctatgtggcgcccggcaacggcggcacggccaccgac
ccgcgcctcaaaaacgtgcccatcaccgatgtggtgcaactgcgccagtgggcgcaggac
aacaagatcaccttgacccttgtgggccccgaagtgcctttggcagccggtgtggtcgat
gagtttcgcgcccacaacatgcgcatcttcggcccgaccaaggccgccgctcagctggaa
agctccaaggccttcagcaaggcattcatgcgccgccatggcattccgacggccgaatac
gccaccttctccgacccggtggccgcccacgcctacgtggacaagatgggcgcacccacg
gtggtcaaggccgacggcttggctgccggcaagggcgtggtggtggccatgaccgtggcc
gaagcccatgaagccattgacttcatgctggtggacaacaccctgggcgtggcccataac
gacggtggggccagagtcgtgattgaagagtttctggaaggcgaagaagccagcttcatc
gtcatggtggatggcaaaaacgtgctgcccctggctacgagccaggatcacaagcgcttg
caggatggcgaccagggccccaacacgggtggtatgggtgcttattcgcccgcaccggtg
gtcaccccggatgtgcatgccaaggcgatgcgcgagatcattctccccacggtcaagggt
atggaagccgacggcattccgttcagcggctttttgtacgccgggctgatgatcgacaag
aacggccagcctaagacgctggagttcaactgccgcatgggcgaccccgagacccagccc
atcatgatgcgcctcaagaccgatctggtggacgtgctgatggccgccactgagcccggc
ccgcacggaaagctcgatgaggttgagttgcagtgggaccgtcgcactgcgctgggcgtg
gtgcttgctgctcacggctacccgatgaacccgcgcaagggtgatgccattaccggtatc
cccaaagagagcgaagacgccgccgtgttccatgccggtaccaccctgcaagacggcacg
gtgttgacctcaggcggtcgcgtgctttgcgtgacggctttggccgacagcgtcaagcag
gcgcagcagcgcgcctaccaagtgatcgacgagattcagttcgacggcatgcaattccgc
cgtgacatcgggtaccgcgccgtcaaaggctga
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