Rhodoferax mekongensis: RAN89_15280
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Entry
RAN89_15280 CDS
T10170
Name
(GenBank) TetR family transcriptional regulator
KO
K03577
TetR/AcrR family transcriptional regulator, acrAB operon repressor
Organism
rmk Rhodoferax mekongensis
Brite
KEGG Orthology (KO) [BR:
rmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rmk03000
]
RAN89_15280
Transcription factors [BR:
rmk03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
RAN89_15280
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_2
TetR_C_6
HAD_2
HTH_73
TetR_C_43
GTA_holin_3TM
Motif
Other DBs
NCBI-ProteinID:
WNO04253
LinkDB
All DBs
Position
complement(3213397..3214023)
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AA seq
208 aa
AA seq
DB search
MARRTKEEALATRELILDAAERVFHQRGVSRTSLQEIAKDAGLTRGAIYWHFENKGELFH
AMMERVTLPMMARLTEITQDDEARPLDKIRRNTATALRQVANDAQVRRVFEIAMQKVEYV
DEMQEMQQRKISGRNECMDDMQRLLQIAQQLGHIKADAHLRNATIGLFALVGGIKYNWLL
DPEAFDLEAVGLATLDAYLAGLKTSPVV
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccgcaccaaagaagaagccttagccacccgcgaactgatcctagacgctgct
gaacgcgtgtttcaccagcgcggggtttcgcgcacttccttgcaggaaattgccaaggac
gcgggtctgacccggggcgcgatttattggcattttgagaataagggcgagctctttcac
gccatgatggagcgggtcaccctgccgatgatggcccgcttgaccgaaatcacccaggac
gacgaagcccggccactggacaaaatccgccgcaataccgctaccgccttgcgccaggtt
gccaacgatgcacaagttcgccgcgtatttgaaatcgcgatgcagaaggtggagtacgtc
gatgaaatgcaggagatgcagcagcgcaagatcagcggccgcaacgagtgcatggatgac
atgcagcgcctgctccagatcgcccaacagttgggccatatcaaggccgacgcacacctg
cgcaacgccaccattggcctgtttgcgctggtggggggcatcaaatacaactggctgctg
gacccggaggcctttgacctcgaagctgtgggcttggctacgctggacgcctacctggcc
ggcttgaagacttcgccggtggtgtga
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