Rhodoferax mekongensis: RAN89_16355
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Entry
RAN89_16355 CDS
T10170
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
rmk Rhodoferax mekongensis
Pathway
rmk03018
RNA degradation
Brite
Enzymes [BR:
rmk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RAN89_16355
Messenger RNA biogenesis [BR:
rmk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RAN89_16355
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Other DBs
NCBI-ProteinID:
WNO04453
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Position
3441920..3443698
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AA seq
592 aa
AA seq
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MNFEELKLAPAIVKAVREQGYETPTAIQAQAIPLVLEGHDLLGGAQTGTGKTAAFTLPLL
HRLSMSRSAQNKFGGTGIRALVLTPTRELAAQVEESVRQYGKYLQLSSTVVFGGVGMNPQ
ISKVKKGVDILVATPGRLLDLAQQGMLDLGQVQMLVLDEADRMLDMGFIHDVKKVLALVP
KEKQSLLFSATFSDEIRELANGLLKNPQSVQVTPRNTTVQRITQVIHPVGRGKKKALLAH
IINEQNWSQVLVFTRTKFGANNVAEFLEKNGITAMALHGNKSQAARTQALSGFKSGDVRA
LVATDIAARGIDIDDLPHVVNYEIPNVSEDYVHRIGRTGRAGADGAAVNLVCLDEEGFMQ
DIERFTKQKIEVKVVDGFGPEPGEKAEPIAMGRQTIWGGAGKPPSRDVMQAAAKAARTEM
LQRVRDNKAGQGGGRSGNAGAGGGGNGGGRGGQGPRGHGGGNSGGGRGPDRGGEFQPPRS
QGPRPAQGRGPRREGGSAEFQPPAGFTHEGRAPRPSTAQPDPMRTSVDMMAGRGARRGGG
GGFGGGGRSGGGNGGGYGGGGGGFGGAGRPGGGGRGGNGPRGPRGPGGSSSR
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgaagaattgaagctggcacctgccattgtgaaggccgtgcgcgagcagggt
tacgagacgcccaccgccatccaggcgcaagccattccattggtactcgaaggccacgac
ctgctgggcggcgcccagacaggtaccggcaagaccgctgcattcaccttgcccctgctg
caccgcctctccatgagccgcagcgcgcagaacaaattcggcggcaccggcatccgcgcc
ctggtgctgacccccacccgcgaactcgccgcccaagttgaagagtccgtgcgccagtac
ggcaaatacctccaactcagctccacggtagttttcggcggagtgggcatgaacccgcaa
atttccaaagtaaaaaagggcgtggacattctggtggccactcctggccgtctgctggat
ttggcccaacaaggcatgctggacctgggccaggtgcaaatgctggtgctggacgaagcc
gaccgcatgttggacatgggcttcatccatgacgtgaaaaaggtgttggccctggtgccc
aaagaaaagcaaagcctgctgttctctgcgaccttcagcgacgaaatccgtgagctggcc
aacggactgctcaagaacccgcaaagcgtgcaagtgactccgcgcaacaccacggtgcag
cgcatcacccaggtgatccaccccgtgggccgcggcaagaaaaaggcattgctcgcccac
atcatcaacgagcaaaactggagccaggtgctggtgttcacccgcaccaagttcggcgcc
aacaacgtggccgagtttctggaaaagaacggcattactgccatggcgctgcacggcaac
aagagccaggctgcccgtacccaggccctgtctggcttcaagagcggcgatgtgcgcgcc
ttggtagccaccgacattgctgctcgcggcatcgacattgacgatctgccgcacgtggtg
aactatgaaatcccgaacgtgagcgaagactatgtgcaccgcatcggccgtactggccgt
gccggtgccgacggcgccgctgtgaacctggtttgcctggacgaagaaggcttcatgcag
gacatcgagcgcttcaccaaacaaaagattgaagtcaaggtggtcgacggcttcggcccc
gagccgggtgagaaggcagaacccatcgccatgggccgtcagaccatctggggtggcgca
ggcaagcctccaagccgtgacgtcatgcaggctgccgccaaggccgcccgcaccgaaatg
ctgcaacgcgtgcgcgacaacaaagccggccaaggcggtggtcgcagtgggaatgccggc
gctggtggtggcggtaacggcggcggtcgtggtggccaaggcccccgtggccatggtggt
ggcaatagcggcggtggccgaggccctgatcgcggcggcgaattccagcccccccgttcg
caaggcccacgtcccgcacaaggccgtggtccgcgccgtgaaggcggcagcgccgaattc
cagccacctgcaggcttcacccacgaaggtcgcgctccgcgtccatccaccgcacaacct
gaccccatgcgcaccagcgtcgatatgatggctggccgtggcgcccgccgcggtggtggc
ggtggctttggcggcggtggccgcagcggaggtggaaatggcggcggatatggtggtggc
ggaggcggcttcggcggcgctggacgcccgggtggcggtggtcgcgggggcaacgggcct
cgtgggccgcgcggtcctggcggctcttctagccgataa
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