Rhodoferax mekongensis: RAN89_16605
Help
Entry
RAN89_16605 CDS
T10170
Name
(GenBank) Ada metal-binding domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
rmk Rhodoferax mekongensis
Pathway
rmk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RAN89_16605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rmk03000
]
RAN89_16605
03400 DNA repair and recombination proteins [BR:
rmk03400
]
RAN89_16605
Enzymes [BR:
rmk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
RAN89_16605
Transcription factors [BR:
rmk03000
]
Prokaryotic type
Helix-turn-helix
AraC family
RAN89_16605
DNA repair and recombination proteins [BR:
rmk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RAN89_16605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HhH-GPD
HTH_AraC
HHH
HTH_Tnp_ISL3
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
WNO04498
LinkDB
All DBs
Position
3483766..3485361
Genome browser
AA seq
531 aa
AA seq
DB search
MRIIPHMPSALPTAKPTPVTTADDAGRYLALQARDARFDGRFFTGVTSTGIYCRPVCRVR
TPKVENCRFFERAAQAEAAGFRPCLRCRPELAPAQSAALHWTTQDASALLALQAADLIEH
ATQADDSPSIVVIADRLGISDRHLRRIFEAHWGLTPLSYLQTRRLLTAKQLLTDTQLPVA
DVAALSGFASVRRFNAAFVQHYRLQPTALRKAMRSDSHATQIGTRKGSDAQHGLATEAAV
FRFQAAYRPPFNVQHLLNFFAQRSVAGVEWVDPEQGVIRRTISLQHKSTTLRGWVEARWM
PDQHRVQLLISESLASALPVVLQRMHAWLDLDADPAAVDVLLCADFPHTEGMRVPGTMDG
LELAVRAILGQQITVKAARTLTERLVSHCGATLTNAPQGLALCFPDAASLAAMSPDALGS
LGIVKQRQQAILSLAQAVQSGALNLQPGSDVPATMAKLQSLPGIGAWTAHYIALRALRWP
DAFPSGDVALQSALGVREASNPAAAADALSQRWRPWRGYATVRAWHSLSKT
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcatcccccacatgccctccgccttgcccaccgccaaacccacgccagtgacg
accgcagacgacgccggccgctacctggcgttgcaggcgcgggatgcgcggtttgacggg
cgctttttcaccggggtgacgagcacgggcatttactgccggccggtgtgccgggtgcgc
acgcccaaagtggaaaactgccgcttttttgagcgtgcggcccaggccgaagctgcaggc
tttcgcccctgcctgcgctgccgccccgaacttgcacctgcgcagagtgctgccctgcac
tggactacgcaggacgccagtgccctgctcgccctgcaagcggcggacctgatcgagcac
gccactcaagctgacgacagccccagcatcgttgtcatagcggacaggctaggtatcagc
gaccggcatttgcgccgcatcttcgaggcgcactggggcctcacaccgctgagctacctg
caaacgcgccgccttttgactgccaagcagctgctcaccgacacgcagctacccgtggcc
gatgtggccgccctcagcggatttgccagcgtgcgccgcttcaatgcggcctttgtgcag
cactaccgcttgcaacccacggcactgcgcaaggcgatgcgttccgactcccacgccacc
caaattggaacccgaaaaggttccgatgcgcagcatggtctggcgactgaggctgcagtt
ttccgtttccaagcggcctaccgcccgcccttcaacgtccagcacctgctgaactttttc
gcgcaacgttccgttgcaggcgtggagtgggtggacccggaacaaggcgtgatccggcgc
actatcagcctccagcacaagagcaccacgcttcgcggttgggtcgaagcgcggtggatg
cctgatcagcatcgcgtgcagctactcatcagcgagtcactggccagcgccttaccggtg
gtgctccagcgcatgcacgcctggctggatctggatgccgacccggctgcggtggacgtg
ctgctgtgcgcggacttcccccacaccgaaggcatgcgggtacccggcaccatggacggc
ctggaattggcggtgcgcgccatcctgggccaacagatcaccgtcaaagcagcccgcacc
ttgaccgaacggctggtgtcgcattgcggcgccaccttaacgaatgcgccccaaggtttg
gcgctttgctttcccgacgctgcctcgctcgccgccatgtcgcccgatgccttgggcagc
ttagggatcgtcaaacaacgtcagcaagccatcctctctctggcgcaggcggtgcagtcg
ggcgccctgaacttacagcctggtagtgatgtaccggccaccatggcgaagcttcagtct
ctgcccggtattggcgcatggaccgcgcactacatcgccttgcgggcgctgcgctggccg
gatgctttcccttcaggcgatgtggctctgcagtccgcattgggcgtgcgagaagccagc
aacccggccgctgcggcagatgcgctctcacaacgctggcgcccctggcggggttatgcc
accgtaagggcgtggcattcactatcaaaaacatag
DBGET
integrated database retrieval system
