Roseimaritima multifibrata: FF011L_03840
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Entry
FF011L_03840 CDS
T07409
Name
(GenBank) 2',5' RNA ligase family
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
rml
Roseimaritima multifibrata
Brite
KEGG Orthology (KO) [BR:
rml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rml03016
]
FF011L_03840
Enzymes [BR:
rml01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
FF011L_03840
Transfer RNA biogenesis [BR:
rml03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
FF011L_03840
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
DUF383
DUF1843
Motif
Other DBs
NCBI-ProteinID:
QDS91653
UniProt:
A0A517M9T6
LinkDB
All DBs
Position
complement(457550..458119)
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AA seq
189 aa
AA seq
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MKDIRTFIAIPMEPKVQSEARSLVRALEAEGDGVRWVPLDDLHLTLKFLGEVDNTRIHGV
CQVVRNCCLETPATELHLTGVGGFPNAERPRIVWAGIADGGPILAALVEKLEIEFAKLGF
KREPRDWQPHLTLGRTRRGGRKPAQLQQRIADNADRELGHMIANKVCVYASFLDKHGPTY
QVMDTIHLE
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatatccgcacctttatcgcgatcccgatggaacccaaagtccagtcggaagca
cgcagtcttgtccgagctctcgaagccgagggagacggcgtgcgctgggtcccattggac
gatctgcatttgaccctgaaattcctcggggaggtcgataatacgcggatccacggtgtc
tgtcaggtagtgcgtaattgttgtctggaaaccccggcaacggaactgcacttaacagga
gtgggcggatttccaaacgcggagcggccccgaattgtatgggccgggatcgctgacggc
ggcccaattctggccgcattggtcgaaaaactagaaattgaattcgccaaactgggattc
aaacgcgagccccgcgattggcagccgcatctgacgctcggtagaactcgccgcggaggc
cgaaaaccggctcagctgcagcaaaggatcgccgataatgccgaccgtgaattagggcac
atgatcgctaacaaggtttgtgtctatgccagtttcctcgacaaacatggtcctacctac
caggtgatggataccattcacctggaatag
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