Roseimaritima multifibrata: FF011L_09870
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Entry
FF011L_09870 CDS
T07409
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rml
Roseimaritima multifibrata
Pathway
rml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FF011L_09870 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rml03019
]
FF011L_09870 (pnp)
03016 Transfer RNA biogenesis [BR:
rml03016
]
FF011L_09870 (pnp)
Enzymes [BR:
rml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FF011L_09870 (pnp)
Messenger RNA biogenesis [BR:
rml03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FF011L_09870 (pnp)
Transfer RNA biogenesis [BR:
rml03016
]
Prokaryotic type
tRNA degradation factors
FF011L_09870 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
KH-I_KHDC4-BBP
S1_RRP5
KH_KhpA-B
KH_2
Motif
Other DBs
NCBI-ProteinID:
QDS92250
UniProt:
A0A517MBJ0
LinkDB
All DBs
Position
complement(1249962..1252238)
Genome browser
AA seq
758 aa
AA seq
DB search
MKIRVEKQIGRHTLSFETGQLAKQAAASVLVQYGDTVVLSAVASGPARQGIDFFPLMCDY
RERYAAAGKFPGGFLKREGRPTTKETLSSRLIDRPIRPLWPAGYKAEVQIQNFVMSSDMQ
NDGDVLAMNGASTACHISPLPFLGPLASVRVGKVDGKLIPFPSVDDLEESELDMIVSGNR
DEVAMIEGFAQEMPEEEMMEAIQFAHGVIKEILDMQEEFYRKVNPTKEPYTVPEDDGLFE
RLNNAYYDEFRSVKQTAGKQERAEAVRALRDRAMSDVIPDPKAEGAISTDRFKSVWHDLE
EKIVCDLIVAGTRPDGRDRTSLRPIYCETDLLPKVHGSALFQRGETQAMVTITLGTSRDE
QRVDGLQDEISKKFMLDYNFPSFSVGECRPIRGPGRREIGHGMLAERSIAPVLPDAEEFP
YTIRVISDILESNGSSSMASVCGATLGLMASGVPISNPVAGISVGLVKSSPDNWCLLTDI
LGDEDHFGDMDFKIAGTQNGITGIQLDLKVTGVSFEIIRATLKQSREARIEILRKMLTTI
SRPRKEISATAPRLLRTKIAADKIGALIGPGGKNIRGIQERTGAVIEVDDDGTVLIASGN
AESAQEALRSVEACTATVQIGKIYDGTVSSIKDFGAFVEILPGRDGLCHISELSSGYISS
IDKVVQVGDSMKVLVIDVDEHDRVKLSRRKAIEELGIEDEMASEAEAEGGERGGDDEDRP
RRPQRNRGRGTGGGGDRGRSGSGRSGGGGGGGGGRPRD
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaattcgagttgaaaagcagataggacgccacacgctgtccttcgaaaccggccaa
ttggccaagcaagcggccgcctcggtgctggtccagtacggtgacacggttgtattgagt
gcggttgccagtgggccagcccgccagggaattgactttttcccattgatgtgtgactac
cgcgaacgctacgcagcagccggtaaattcccaggtggcttcctgaaacgtgaaggccgc
ccgaccaccaaagaaacccttagcagccgcctgatcgaccgcccgatccgccctctttgg
ccagccggttacaaagctgaagttcaaatccagaacttcgtcatgtccagcgacatgcaa
aatgacggcgacgttttggcaatgaacggtgcttccaccgcttgccacatcagccccctg
ccattcctcggaccgctcgcaagcgtccgcgtcggcaaagttgatggcaaactgattcct
ttcccatcggtcgatgaccttgaggaaagcgaactggacatgatcgtcagcggcaaccgc
gatgaagtcgcgatgatcgagggctttgcccaagaaatgcctgaagaagagatgatggaa
gcgattcagttcgctcacggcgtcatcaaagaaatcctcgacatgcaagaggaattctat
cgcaaagtgaacccgaccaaggaaccttacaccgttcctgaagacgacggcctatttgag
cgtctgaacaacgcttactacgacgaattccgttcggtcaagcaaaccgctggcaaacaa
gaacgagccgaagccgtccgcgcccttcgcgatcgtgcgatgagcgacgtcattcctgac
ccgaaagccgaaggcgcgatcagcaccgaccgcttcaaatcggtctggcacgacctggaa
gaaaaaatcgtctgcgacctgatcgtcgctggaactcgccccgatggtcgcgatcgcacc
tcgcttcgccccatctactgcgaaaccgacctgcttccaaaggttcacggttcggcattg
ttccaacgtggcgaaacccaagcgatggtcaccatcacactgggaacctcgcgagacgaa
caacgcgttgacggactgcaggacgaaatcagcaagaagttcatgctcgattacaacttc
ccatccttctcggtcggcgaatgccgcccgatccgaggaccaggacgtcgtgaaatcggt
cacggaatgctggccgagcgaagcatcgctcctgtccttccagacgcagaagaattccca
tacaccatccgcgtcatcagcgacatcctggaatcgaatggctccagctcgatggcttcg
gtttgcggtgcaaccctcggcctgatggcttcgggcgttccaatcagcaatccggttgca
ggtatctcggttggcttggtcaaatcctcaccagacaactggtgcctattgaccgacatc
cttggcgacgaagatcacttcggcgacatggacttcaaaatcgctggaactcaaaacggc
atcaccggcattcagttagacctgaaagtcaccggtgtttcgtttgaaatcatccgtgcg
accctgaagcagtcccgcgaagctcggatcgaaatccttcgcaagatgttgacaacgatc
tctcgcccacgcaaagagatcagcgccacagcgcctcgcctgttgcgaaccaagatcgct
gccgacaaaatcggcgctttgatcggtcctggcggcaaaaacatccgcggcatccaagaa
cgaaccggtgcggttatcgaagtcgatgacgacggtaccgtcttgatcgccagcggcaac
gctgaaagtgctcaagaggcccttcgcagtgttgaagcttgcacggcaaccgttcagatc
ggcaagatctacgacggcaccgtcagcagcatcaaggacttcggagcctttgtcgaaatc
cttccaggacgtgacggcttgtgccacatcagcgaactatccagtggctacatcagcagc
atcgacaaggtcgtccaagttggcgattcgatgaaagtgttggttatcgatgtcgacgag
cacgaccgagtgaaattgagccgccgcaaggcgatcgaagaacttggcatcgaagacgaa
atggcctccgaagctgaagccgaaggtggcgaacgtggtggagacgacgaagatcgccca
cgccgtccacagcggaaccgcggacgcggtaccggcggtggcggagatcgtggccgtagc
ggttcaggccgcagcggtggcggtggtggtggtggtggtggccgcccacgcgactga
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