Roseimaritima multifibrata: FF011L_10790
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Entry
FF011L_10790 CDS
T07409
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rml
Roseimaritima multifibrata
Brite
KEGG Orthology (KO) [BR:
rml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rml03016
]
FF011L_10790 (rnd)
Enzymes [BR:
rml01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
FF011L_10790 (rnd)
Transfer RNA biogenesis [BR:
rml03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FF011L_10790 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
QDS92337
UniProt:
A0A517MC35
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All DBs
Position
complement(1356924..1358186)
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AA seq
420 aa
AA seq
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MVEFYLASYSQGCDSAIPFPTPDQATVRHESIQTGEELERFCEQIAQESWVGFDTEFVSE
DRYRPQLCLLQIAAGDRLAVVDPLTMPETQPFWDLISTPGRTVIAHAAREEIRFCYRFTG
KPIAGLFDVQLAAGFVGMEYPASLGTLVSKLEGKTLPKGESRTNWRHRPLSDHQILYALQ
DVTELRSMQQKLSKKVDNLQRSEWLGEELDALQQTVIDGEQRENWRRVSGMSGLTPRQME
IVRQVWLWREDRAEESDQPPRRVLRDDLVIELAKRQTDNIERIRSLRGMERRNLVPHFEA
LSEAIRIALEMREEDLPKRPRSNRKKYANMLSQFLSMSIACVCRKHQMAPSIVGNMDNVR
ELLAYELDGDGKDSEASLPYLLRGWRSEVVGKSFRDLLSGDLAIRVADRNADVPLEFIDT
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaattctacttggcaagctacagtcagggctgcgattccgctatccctttcccc
actcccgatcaggccaccgtgcgacacgaatccattcagaccggtgaagaactggaacgg
ttctgcgaacaaatcgcccaggaatcatgggtcgggtttgacacggaatttgtttcagaa
gaccgctatcgtcctcaattatgtttgctgcaaattgcagcgggcgaccgcttggcggtc
gtcgaccccctgacgatgccagaaactcaacccttctgggacttgatcagcacccccggc
cgaacggtgatcgcccacgcggcccgcgaagaaattcgcttctgctaccgcttcaccggc
aaaccgatcgcaggcctgtttgacgtccaattggctgccggtttcgtcggcatggaatac
cccgcttcactaggaacgttggtatccaaactagagggaaaaacgcttcccaaaggcgaa
tcacgcacgaactggcgccatcgccccctaagcgaccaccaaatcttatacgccctgcaa
gacgtaaccgaactacgttcgatgcagcaaaaactttcgaaaaaagtcgataacctccag
cgcagtgagtggctgggcgaagaactggatgcactgcagcaaaccgtcatcgatggcgaa
caacgcgagaactggcgacgagtcagcggcatgtcgggcctgacaccgcgacagatggaa
atcgtgcgacaggtctggctgtggcgtgaagaccgagccgaagagtctgaccaaccgcca
cggcgagtccttcgcgacgacctagtcattgagcttgccaaacgtcagaccgacaacatt
gaacgcattcgctcattgcgagggatggaacgccgcaacttggtccctcacttcgaggcc
ctttccgaagcgattcggatcgctctagaaatgcgtgaagaggatcttcccaaacggccg
cggagcaatcgaaaaaaatacgccaacatgctctcgcagtttctctccatgtcgattgcc
tgcgtctgccgcaagcaccaaatggcaccctcgatcgtcggcaacatggacaacgtccgt
gaactgctggcctacgaactggacggcgacggcaaagactccgaagcctcgctgccctac
ctgctgcggggctggcgaagcgaggttgtcggaaaatccttccgagacctactgagcgga
gacctagcgatccgagtcgccgaccgaaacgccgatgtgccgctcgagttcatcgacacc
taa
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