Roseimaritima multifibrata: FF011L_13300
Help
Entry
FF011L_13300 CDS
T07409
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
rml
Roseimaritima multifibrata
Pathway
rml03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rml00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FF011L_13300 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rml03021
]
FF011L_13300 (rpoB)
03400 DNA repair and recombination proteins [BR:
rml03400
]
FF011L_13300 (rpoB)
Enzymes [BR:
rml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FF011L_13300 (rpoB)
Transcription machinery [BR:
rml03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FF011L_13300 (rpoB)
DNA repair and recombination proteins [BR:
rml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FF011L_13300 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Peptidase_M23
SSO2105_N
RnfC_N
ApoB100_beta_belt1
Motif
Other DBs
NCBI-ProteinID:
QDS92583
UniProt:
A0A517MCF6
LinkDB
All DBs
Position
complement(1713672..1717394)
Genome browser
AA seq
1240 aa
AA seq
DB search
MATTSNRRLEPTTVRHFGSDREGFDLPDLTALQTASYSVFLQEDSEPTGRRDVGLEGVLR
EIFPISSYDGNINLEYLRYELGKPRYTPQECRQLRLTYGRPLRVWLRLMRDEPVDEEVYL
GDLPIMMGGGEFIINGAERVVVSQLHRSPGVDFVLEQEGTSDRKLPSCRVIPERGSWIEV
NVTKKDALTVRIDQSGKFAATTLLRAMDPSLSTDADLLRAFYKTSTETISDGRSAAKIEG
NVAVDDIIYPSDSDRAGEIIIEAGHKITKSVAETICTSGVTEVEIMDGPKVPLIFNTLGD
DNTSSHEEALLRIYQRLRPGNPPQLEKARTLFNEKFYDENRYRLGKVGRFRLNRKLGTDI
SESEMTLRHQDMISAIAYLLDLFDPDSGAEIDDIDHLGNRRLRTIDELAAEELRKGFLKL
RRTVQERMSMKDAEDMTPRSLINPKSVSAAIDYFFGRGELSQVVDQTNPLSQLTHERRLS
ALGPGGLNRKRAGFEVRDVHISHYGRICPIETPEGTNIGLISSLAIYAGVDGYGFLVTPY
RKIQESRVTDEVVWLRADEEDESYVAPADAEVKDGSLVPGPNMIARVRSDFEIVHPDRID
YMDVAPAQMVGVSAGLIPFLEHDDANRALMGSNMQRQAVPLLVAEPPIVGTGMERQVAKN
SAMVVRARRAGKVTYADAKRIEIGSDHYDLKKYQGLNERTCMNQKPIVSVGDKVEQNQII
ADGAATRNGELALGRNVLVGFMSFDGYNYEDAIILSEELVKNDTYTSIHIEDFDVEIRET
KLGREEFTRDIPNVSEKALRNLDDSGIVQVGTYVRPGDVLVGKVSPKSKTELTPEEKLLH
AIFGRAGEDVKNDSLEVPSGIEGIVIDTQKFSRRMSLTEDERKQFEKELKEVESEGNQEI
ASTFTSLINELEATANTKLKDAEGNPLSDGQDPKFIAEQAVNFQLKRVIEQVKGEELREE
VEKVFKQQWINVEQAIDSRDRKLNSMKRGDELRSGVLQMVKVYIANRRVISVGDKMAGRH
GNKGVIGKILPVEDMPFLPDGTPLQIMLNPLGVPSRMNVGQILETHLGWAGAKLGFQAIT
PVFDGASEEDINDCLEEAGLPRHGKVRLLDGRTGEAMSQETTVGYIYMLKLHHLVDDKVH
ARSTGPYSLITQQPLGGKARFGGQRFGEMEVWALEAYGAAYILQELLTVKSDDVEGRTKI
YESMVKGENTLEAGTPASFDVLTNEIRGLALNMQLEKRPV
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atggctactacgtcgaatcgtcgtcttgaaccaaccaccgtccgtcactttggctccgat
cgagaaggtttcgacctgcccgatttgactgccctgcaaacggctagctactctgtattc
ctacaagaagactccgagcctacgggccgtcgtgatgtcggccttgaaggagtgcttcgt
gagattttcccgatcagcagttatgacgggaacatcaacctggaatacctccgttacgaa
ttagggaagcctcgctacacccctcaagagtgtcgccagcttcgcttgacctacggccgt
cctcttcgtgtttggcttcgcctgatgcgagacgaacccgtggacgaagaagtctacttg
ggcgacctgccaatcatgatgggtggtggtgaattcatcatcaacggtgccgaacgcgtt
gtcgtttcgcagcttcaccgtagccctggtgttgactttgttctggaacaagaaggaaca
agcgatcgcaaattgccaagttgccgagtcattccggaacgtggatcatggatcgaagta
aacgtcacgaagaaagacgcgttgaccgtccgaatcgaccagagtggtaaatttgccgca
accactttgttgcgagcaatggaccccagcctgtcgaccgacgccgatctcctgcgagcc
ttctacaagacttcgaccgaaacgatctccgacggacgcagtgccgctaaaatcgaaggg
aatgtcgccgttgacgacatcatctatccttccgatagcgaccgcgccggcgaaatcatc
atcgaagcaggacacaagatcaccaaaagtgtcgccgaaacaatctgcacttctggtgtt
accgaagtggaaatcatggacggaccaaaggtcccgttgattttcaatacgctcggtgac
gacaacaccagcagccacgaagaagccctcctccgtatctaccaacgtctgcgtccgggc
aacccgccgcaactggagaaagctcggactctcttcaacgagaaattctacgatgaaaat
cggtaccgtttgggcaaggtcggtcgcttccgcctgaaccgcaaactgggcaccgacatc
agcgaatcagaaatgacgctgcgtcaccaggacatgatctccgcaatcgcctacctgctg
gatctgttcgatccggacagtggtgccgaaatcgatgacattgaccacctgggcaatcgt
cgcctgcgaacgatcgacgaacttgcagctgaggaactccgcaaaggattcctgaaactg
cgtcgtaccgtccaagagcgaatgagcatgaaagatgccgaggacatgacgcctcgctct
ttgatcaacccgaaaagtgtttccgcagcgatcgattacttcttcggtcgtggcgaactt
tcgcaggtcgttgaccagacgaacccgctgtcacaactgacacacgaacgtcgtttgtcg
gctctggggcctggcggtttgaatcgtaaacgagccggttttgaagttcgcgacgttcac
atttcccactacggacgtatctgtccgattgagactcctgaaggtacgaacattggactg
atcagttcgctggcgatttacgccggcgtcgacggttacggatttttggtcacgccctat
cgcaagattcaagaaagccgagtcaccgacgaagttgtctggttgcgagccgacgaagaa
gatgaatcgtacgtggctccggcggatgccgaggtcaaggacggttcgcttgttccagga
ccaaacatgatcgctcgagtccgtagtgacttcgagatcgttcatcctgaccgcatcgat
tacatggacgttgctccggcccagatggtcggggtttcagccggtttgattccgttcctc
gaacacgatgatgcaaaccgtgcattgatgggttcgaacatgcagcggcaagccgtccca
ttgttggtggcagaaccaccgatcgtgggaactggcatggaacgtcaagtcgccaagaac
agcgcgatggtcgtgcgagcccgccgggctggcaaagtgacctacgccgatgcaaagcga
attgaaatcggtagcgatcattacgacctgaagaaataccaaggtctgaatgaacgaacc
tgtatgaaccaaaaaccgatcgtcagcgtcggtgacaaggttgaacagaatcagatcatc
gccgacggagctgccacccgaaacggtgaactggctctgggacgtaacgtgctggtcggg
tttatgtcgtttgacggctacaactacgaagacgcgatcatcctgtcggaagaattggtg
aagaacgacacgtatacttcgatccatatcgaagacttcgatgtcgaaattcgcgaaacg
aaattgggccgcgaagaattcactcgcgacatccccaatgtttctgaaaaagctcttcgt
aacctggatgattccgggatcgttcaagtcggcacctacgtccggccaggcgatgtcctg
gttggtaaggtcagcccgaaaagcaaaaccgagttgactccggaagaaaaactccttcac
gcgatcttcggtcgagccggtgaggatgtgaagaacgattcgctggaggttccttcgggg
atcgaaggaatcgttatcgacacgcagaaattctcgcgtcgcatgagcctgaccgaagac
gaacgaaagcaattcgaaaaagaattgaaggaagttgaaagcgaaggcaaccaagaaatc
gccagcactttcaccagcctgatcaacgaactggaagcgactgccaacaccaaactgaaa
gacgctgaaggcaacccactgtccgacggccaagacccgaaattcatcgcggaacaagcg
gtcaatttccagttgaagcgggttatcgaacaggtcaagggcgaagaacttcgcgaggaa
gtcgaaaaggtcttcaagcaacagtggatcaacgttgaacaagcgattgactcgcgagac
cgtaaactgaacagcatgaagcgaggcgacgagcttcgcagtggcgtgctgcagatggtc
aaggtctacatcgccaatcgacgcgtcatcagcgttggggacaagatggcaggtcgccac
ggtaacaagggtgttatcgggaagatcttgcctgtggaagacatgccgttccttccggat
ggtaccccactgcagatcatgctgaatccgctgggagttcccagtcgtatgaacgtggga
cagattctggaaacgcacctcgggtgggccggagccaaactgggcttccaagccatcacc
ccggtctttgatggagccagcgaagaagacatcaatgactgtctagaagaagcaggccta
ccaaggcacggaaaagtgcggcttctggatggacgaaccggcgaagcgatgtctcaagag
acaaccgttggttacatctacatgctgaaactacatcacttggtcgatgacaaagtccac
gctcgtagcactggtccatactccttgattacccaacaacccttgggtgggaaggctcgc
ttcggcggccaacgcttcggggaaatggaagtctgggcgttggaagcttacggggcggca
tacatcctgcaagaacttctcaccgtcaagagtgacgatgttgaagggcgtaccaagatc
tacgaatcgatggtcaaaggggaaaacaccctggaggcaggcacgcccgccagtttcgac
gttttgacaaacgaaattcgaggactagcactcaacatgcaattggaaaaacgaccggtt
tag
DBGET
integrated database retrieval system
