Roseimaritima multifibrata: FF011L_15340
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Entry
FF011L_15340 CDS
T07409
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
rml
Roseimaritima multifibrata
Pathway
rml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FF011L_15340 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rml03019
]
FF011L_15340 (deaD)
03009 Ribosome biogenesis [BR:
rml03009
]
FF011L_15340 (deaD)
Enzymes [BR:
rml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FF011L_15340 (deaD)
Messenger RNA biogenesis [BR:
rml03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FF011L_15340 (deaD)
Ribosome biogenesis [BR:
rml03009
]
Prokaryotic type
rRNA helicases
FF011L_15340 (deaD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
MCPsignal
CMS1
AAA_22
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
QDS92785
UniProt:
A0A517MD26
LinkDB
All DBs
Position
1979726..1982290
Genome browser
AA seq
854 aa
AA seq
DB search
MNAENTPVPQPESDIEQLLIELGLRDPVEVEPAAPVAKQAAAPVAEAAAPVAEVAAPVAE
EAAPVAEIAAPVAEIAAPVAEIAAPVAEVAAPVAEVAAPVAEVAAPVAEVAAPVAEAAAP
VAEEAAPVAEEAAPVAEAAAPVAEEAAPVAEVAAPVAEVAAPVAEVAAPVAEAAAPVAEE
AAPVAEVAAPVAEVAAPVAEVAAPVAEVAAPVAEVAAPVAEVAAPVAEVAAPVAEVAAPV
VEVAAEPEGFAAIALHPSVQEAVEKSGYTIPTDIQAQIIPYMLDGRDVLAQSQTGTGKTA
AFALPILSRIDTQKGIPQVLVLAPTRELAIQVAKSFSTYGRFVQDFRGVAIYGGQDYEAQ
FRALRRGVQVVVGTPGRVIDHVKRGSLDLSQIECLVLDEADEMLNMGFLEDVQFVLDQTP
KDRQVALFSATLPAPIRSIAQRYLNNPAKVTVERKTMTAESIRQRAVLVPVRNKIDVLLR
FLEIEATDGVIVFTKTREATLTVAEELNQAGLKAVALNGDMPQKTRERTIDQLKNKQLDI
LVATDVAARGLDVPRISHVFNYDLPHDGESYVHRIGRTGRAGRSGEAIIFLTGGQRGRLS
GIERLTNQPIEIVQAPSVDEINAHRIERFKEQITEVSASQDLSLFKKMIAEYAEETEKPL
DMIAAALAEICQQGRPFLMKPQPKAKKKQREMEDRGGRSGRERGEFRGGRPAGRRVGPPA
AGMTRYRLEVGARDGVQPGNFVGAIANEAGIQGNSIGPISIHETYSTVDLPEGMPRDIYQ
TLRNTWVSGRQLRIRVAGDEGAEGGFAGKSSHSKPSHHQGSGHGGGGKKPFRKNKAKTKG
PAPHAKAKFQKGKA
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctgaaaatacgcccgtaccgcaacctgaaagtgatatcgaacaactgctcatc
gagctgggacttcgtgatcctgtggaagtagaacctgccgctccggttgcaaaacaagct
gctgctccggttgctgaagccgccgctccggttgctgaagtcgccgctccggttgctgaa
gaagccgctccggttgctgaaatcgccgctccggttgctgaaatcgccgctccggttgct
gaaatcgccgctccggttgctgaagtcgctgctccggttgctgaagtcgctgctccggtt
gctgaagtcgctgctccggttgctgaagtcgccgctccggttgctgaagccgccgctccg
gttgctgaagaagctgctccggtcgctgaagaagctgctccggtcgctgaagccgctgct
ccggtcgctgaagaagccgctccggttgctgaagtcgccgctccggttgctgaagtcgcc
gctccggttgctgaagtcgccgctccggttgctgaagccgctgctccggtcgctgaagaa
gccgctccggttgctgaagtcgccgctccggttgctgaagtcgccgctccggttgctgaa
gtcgccgctccggttgctgaagtcgccgctccggttgctgaagtcgccgctccggttgct
gaagtcgccgctccggttgctgaagtcgccgctccggttgctgaagtcgccgctccggtt
gttgaagttgctgcggaacctgaagggtttgcggccatcgccttgcatccgtccgttcaa
gaggctgtcgagaaatcgggttatacaattccgaccgacattcaggcccagattattcct
tacatgttggatggccgcgatgttttggctcagtcccaaacgggaactggcaagacggcg
gcatttgcacttccgattctctctcggatcgacactcagaaggggatcccgcaggtcttg
gttctggctccaacgcgagagttggcgattcaggttgctaagtctttttcaacctatggc
agattcgttcaggatttccgtggcgtcgcgatttacggcgggcaggactacgaagctcag
tttcgtgcccttcgtcgtggcgtgcaggttgtggtcgggaccccaggtcgcgtgatcgat
cacgtcaagcgtgggtcgcttgatctaagccagatcgaatgcttggtcttggacgaagcg
gacgaaatgctcaacatgggattcttggaagacgtccagtttgtcttggaccagactccc
aaagatcgccaagtcgctctcttctcggccaccttgcccgctccgattcgcagtatcgct
cagcgatacctgaacaatccagcgaaggtcaccgttgagcggaagacgatgacagcggaa
tcgatccgccagcgtgcggttcttgttcctgtccgcaataagatcgacgtcctgctgcga
ttcttggaaatcgaggcgaccgacggcgtgattgtctttacgaaaacccgtgaagcaacg
cttaccgttgcagaagaattgaatcaggccggcctgaaagcggtagctcttaatggagac
atgccgcagaagactcgtgagcgtacgatcgaccagcttaagaacaagcagctggatatc
ttggtcgcgaccgacgttgcagctcgagggttggacgtgccgcgaatcagccacgtcttc
aattacgacctgccgcacgatggcgaatcttacgttcaccgtatcgggcgaaccggacgt
gctggccgaagtggcgaagcgatcatctttctgacgggcggccagcgaggccgattgtcc
gggatcgagcgtttgaccaatcagccaatcgaaatcgtgcaggctccatcggttgatgaa
atcaacgctcatcgtatcgaacgctttaaagaacagatcactgaagttagtgcttcgcaa
gatctgtcgctctttaaaaagatgatcgctgagtacgcagaggaaaccgaaaagccgctc
gacatgatcgcagcagcacttgctgaaatctgtcagcaggggcgtccgttcctgatgaag
cctcagccgaaagcaaagaagaagcagcgagaaatggaagatcgcggcggccgctctggt
cgcgagcgaggcgaattccgtggcgggcgacctgcagggagacgtgttgggccaccagca
gcgggcatgactcgttaccggcttgaagttggagctcgcgatggtgttcagccaggcaat
tttgtcggggccattgccaatgaagccgggattcaagggaattccattgggccgatttcg
attcacgaaacctacagcacggttgatcttcccgaaggaatgccacgcgacatttaccaa
acgttgcggaacacttgggtcagtggccggcagttgcggattcgtgttgccggagacgag
ggagccgaaggcggtttcgctggaaagtccagccattcaaagccttcccatcatcaaggc
agcgggcatggcggaggtggcaaaaagccattccgaaaaaacaaagccaagaccaaggga
cctgctccgcacgccaaagccaagttccaaaaaggcaaggcgtaa
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