Roseimaritima multifibrata: FF011L_20690
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Entry
FF011L_20690 CDS
T07409
Symbol
rpoA_1
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rml
Roseimaritima multifibrata
Pathway
rml03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rml00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FF011L_20690 (rpoA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rml03021
]
FF011L_20690 (rpoA_1)
03400 DNA repair and recombination proteins [BR:
rml03400
]
FF011L_20690 (rpoA_1)
Enzymes [BR:
rml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FF011L_20690 (rpoA_1)
Transcription machinery [BR:
rml03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FF011L_20690 (rpoA_1)
DNA repair and recombination proteins [BR:
rml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FF011L_20690 (rpoA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
TPR_2
TPR_19
TPR_1
TPR_16
TPR_12
TPR_14
TPR_17
TPR_6
TPR_8
TPR_11
ANAPC3
TPR_7
TPR_10
TPR_9
MIT
Sarcoglycan_2
SAM_EPH
HAT_PRP39_C
ARC6
PknG_TPR
Motif
Other DBs
NCBI-ProteinID:
QDS93307
UniProt:
A0A517MEU9
LinkDB
All DBs
Position
complement(2638552..2639877)
Genome browser
AA seq
441 aa
AA seq
DB search
MAEAEVLDLKEVVLSNTSFGPQEIANIRTAIASDFIHFGELRDAVNQMEQETDRSPATQT
KFGVCQLLLGRFKAARETLSSSDGGALAQFYLGRCAFELGEYDVALTQYEAARKAGYDED
QCKLAVAETKRYMRDLEGSMNILDDMFGPIEQTAEYQYQRAATVAAIGDKKAEAINHYER
ALQIDEGHAGALFGLALENDRNGNDDEAIAMYERAAAGFPTGVGVLINLGILYEDRNQFD
RAQVCYRRILECYPDHPQATLYMKDASAQGNVLYDEETQRRNDRLAQVLNLPVANFELSV
RSRNCLQKMGVDTLGDLTRTSEAELLASKNFGETSLYEIREMLTGKGLSLGQFAHEKKSP
DPPIDTSHMSADEQALLDRPISDLNLSVRARKCMVRLGLNTIGELVRKTGDEMLECKNFG
VTSLTEVREKLTEMSLKLRGD
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagccgaagttcttgatttaaaagaagtcgtcctgtcgaacacttcttttggt
ccccaagagatcgccaacatccgcacggctatcgcctcggatttcattcattttggtgaa
ctgcgcgatgcagtgaaccaaatggaacaggaaaccgaccgtagtccggcgactcagacc
aaatttggtgtctgtcaacttctcctgggtcgcttcaaagcggctcgcgagacgcttagc
agttccgatggtggagcacttgcccagttttacctgggacgctgcgctttcgaactgggc
gaatatgacgtggccctcacccaatacgaagcggcccgcaaagcgggttacgacgaggat
cagtgcaaacttgccgttgcggaaacgaaacggtacatgcgtgacctcgaaggttcgatg
aacatcctggacgatatgttcggccccatcgaacagaccgctgaataccaataccaacgc
gccgcgaccgtcgccgcaatcggtgacaaaaaagcggaagcgatcaaccactacgaacga
gccctccagattgacgaaggtcatgccggagcattgtttgggttggccttggaaaacgat
cgcaacggaaacgatgacgaagcgatcgcgatgtacgagcgagccgcggccggatttcct
accggtgttggtgtcttgatcaacctgggaatcctgtacgaagatcgaaatcagttcgat
cgggctcaggtctgctaccggcgaattctggaatgctatccagatcacccccaagcaacc
ctctacatgaaagacgcttcggcgcagggcaacgtcctgtacgacgaagaaacccaacgt
cgcaacgatcgcttggctcaagtactgaacctgccggtcgctaacttcgaactttccgtc
cgtagccgtaactgcttgcagaagatgggcgtcgatacccttggggatctgacccgaact
tccgaagccgagctgctggccagtaagaactttggcgaaaccagcctgtacgaaattcgc
gaaatgctgaccggcaagggactttccctgggtcagtttgctcacgagaaaaagtcaccc
gatccaccgatcgatacttcgcacatgtcggccgacgaacaagctttgcttgaccgtccg
atctcggacctgaacctttcggttcgagcccgtaaatgcatggtccgccttggcctgaac
accattggtgaactggtccgcaagacgggcgacgaaatgcttgagtgcaagaacttcggt
gtgaccagccttaccgaagtccgcgaaaagctgacggaaatgagcctgaagcttcgcggt
gactga
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