Roseimaritima multifibrata: FF011L_23720
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Entry
FF011L_23720 CDS
T07409
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rml
Roseimaritima multifibrata
Pathway
rml03030
DNA replication
rml03410
Base excision repair
rml03420
Nucleotide excision repair
rml03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FF011L_23720 (polA)
03410 Base excision repair
FF011L_23720 (polA)
03420 Nucleotide excision repair
FF011L_23720 (polA)
03440 Homologous recombination
FF011L_23720 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rml03032
]
FF011L_23720 (polA)
03400 DNA repair and recombination proteins [BR:
rml03400
]
FF011L_23720 (polA)
Enzymes [BR:
rml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FF011L_23720 (polA)
DNA replication proteins [BR:
rml03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FF011L_23720 (polA)
DNA repair and recombination proteins [BR:
rml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FF011L_23720 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FF011L_23720 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
DNA_pol_lambd_f
RNase_H_2
HHH
HTH_60
RecR_HhH
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
QDS93599
UniProt:
A0A517MFD2
LinkDB
All DBs
Position
3026690..3029515
Genome browser
AA seq
941 aa
AA seq
DB search
MTEDLLGFPRNEPDLLDSQPRLFLLDGMALVYRAHFALIRSPRRNSAGLCTSAVFGMTNT
VMDILKKERPTHIAVAFDTSEPTERHRMFPAYKAQRDAMPEEIALQLPIIDRLFSALKIE
SLRNPGYEADDIIGTLATEAAKQQVETWMVTPDKDYDQLVGEHVSIFRPGRKGSDFERIG
VPEVLQKWGIERVDQVIDVLGLMGDASDNIPGVPGIGPKTAQKLIQQFGSIESLLDNADQ
LKGKQRERVEENRELALQSKQLVTIQLDVPQDVSIESLRWDGPDEAALQSLFMELEFDTL
GKKYFGAKFSSAANRSANLRTQRVKEIQTSLFDEPVTEKTIVDVPHNYQIVESFEDQDAL
IEKLQAQPAFAFDTETTGLDPRTADPLGLAFSFASHEAYYVVCPDDPQAAKDVLKRFEVV
LNDPKIKKIGHNLKYDLSLLKWQGISYCGPLFDTMLAHTVKEPEMRHGLDELARIYLGYQ
PIPTSDLLGPKGKEQRTMRDVPQEKVVEYACEDADVTWQVAQILEKELDGAELTRLCEDV
EFPLVSVLIDMEFEGIRLDTDALAAYSDELSIEIEQLRSEIFAAAGHEFNIDSPKQMGVV
LFDEMQLEANPKKTATGQYSTRESELERLSARHPIIANILEYRNAVKLKSVYVDQLPTHV
DPRTKRIHTHYSQSWTATGRMQSNDPNLQTIPIRKARGRGIRAAFIARDDSHRLLSADYS
QIELRVMAELSQDEAMLEAFREQIDIHTATAAKVYKVDLEDVTREMRDKAKTVNFGIIYG
ISAFGLQQRLNIPRDEAKQLIDNYFEKYPGVQRYIDETIAFAKEHGYVQTLTGRRRYLRD
IDSRNRGLASAAERLAMNSPIQGTAADMLKLALIKVHQELQDRKLETKMLLSVHDEIVFD
MPLEEEATVIPVIEEAMRNALPMSVPIVVEVGMGTNWLEAH
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagatttactggggtttccccgcaacgaacccgatttgcttgattcgcagcca
cgcttgtttttgcttgacggcatggcgttggtctaccgagcccacttcgcactcattcgc
agcccgcgaagaaattctgcagggctttgcacgtccgccgtttttgggatgaccaacacg
gttatggacatcctgaaaaaggagcgaccgacgcacatcgccgtagcctttgatacgagc
gaaccgaccgagcgtcaccgtatgttccctgcctataaggcacaacgtgatgccatgccg
gaggagattgcactccagttgccgatcatcgatcgactgttctctgcgttgaaaatcgaa
tcgctgcgcaacccgggttacgaagcggacgacattattggcacgctggcaaccgaagcg
gccaagcaacaagttgaaacctggatggtgacccccgacaaggattacgaccagttggtg
ggggaacatgtttcgatctttaggcccggaagaaagggatcggattttgaacgaatcgga
gtccctgaagttcttcaaaaatggggaattgaacgggtcgatcaagtgattgatgtgctt
gggttgatgggggatgcgagcgataacattcccggcgttcccggcatcggtccgaaaacc
gctcagaagttgattcagcaatttggatcgatcgaatccctgttggacaatgcagaccaa
ctgaaagggaagcagcgtgaacgagtcgaagaaaatcgcgaacttgcgttgcagtcgaaa
cagttggtgacgattcagttggacgttccacaagacgtcagtatcgaatcgcttcgttgg
gacggcccggacgaagccgccttgcagtcgctgttcatggaattggaattcgacacgctg
gggaagaaatatttcggagcgaaattctcttcggcggccaaccgttcggcaaacttgcga
acgcaacgcgtcaaggaaatccaaacatcgctgttcgatgaaccggtaaccgagaaaacg
atcgttgatgttccccacaattatcaaatcgttgaatcgttcgaagaccaagatgcattg
attgaaaagttgcaggcgcagccggcgtttgcatttgatacggaaacaaccggtttggat
ccccgcaccgcggacccgctggggttggctttttcttttgccagccatgaagcgtattac
gtcgtctgccccgatgacccgcaagctgcaaaagatgttttgaaacgatttgaagtggtt
ctaaacgatccaaaaatcaagaagatcgggcacaacctgaagtacgatctctcgttgctg
aagtggcaagggatttcgtattgcggcccgctcttcgacaccatgcttgcccatacggtc
aaggaaccggaaatgcggcatggcttggatgaattggcgaggatttacttggggtatcaa
ccgattcccaccagcgacctgcttggcccgaaagggaaagagcagcggacgatgcgtgat
gtgccgcaggaaaaggtcgttgaatatgcctgtgaagatgccgacgtcacctggcaggtg
gctcagattctagaaaaagagctggatggggcggaactgacgcggctgtgtgaagacgtt
gaattcccgttggtgtcggtgctgatcgacatggagtttgaagggattcgattggatacg
gatgccctggcagcgtactcggatgaattgagtatcgaaatcgaacaactgcggagcgaa
atttttgctgcagcaggtcatgaattcaatattgattcccctaagcaaatgggagtcgta
ctgtttgacgaaatgcagctagaagccaacccaaaaaagacggctaccgggcagtactcg
acaagagaatcggagcttgagcggttgtcggctagacatccgatcatcgcgaatattttg
gagtatcgcaacgctgtcaaactgaaatccgtttacgtcgatcaactgcccacccatgtc
gatccacgcaccaaacggattcatacgcactattcgcagtcgtggacggcgaccggacga
atgcaatccaatgaccccaacctgcagaccatccccattcgcaaggcgcgcggccggggg
attcgagcagcctttatcgcaagagatgattcgcatcgattgctctcagcggattactcg
caaattgaacttcgagtcatggcagagctgagccaagatgaagcgatgcttgaggctttt
cgggaacagatcgacatccataccgcaacggccgccaaggtctataaagtcgacttggaa
gacgtgacgcgtgaaatgcgcgacaaagcgaaaacggtcaactttggcatcatctatggg
atttcagcgtttgggttgcagcaacgattgaacatccctcgagacgaagcgaagcagttg
atcgacaactactttgaaaagtatccgggcgtacaacggtacatcgatgagacgattgcg
tttgccaaagagcacgggtacgtccagacgctgactggccggcgacgttatttgcgagac
atcgattcccgcaatcgagggttggcgtcggcagcagaacgcttggcaatgaacagtcca
attcagggtaccgctgcggacatgttgaaactggcgcttatcaaagttcatcaagaacta
caggatcgcaagctggaaaccaagatgttgttatcggtccatgacgaaatcgtgttcgat
atgccgctagaggaagaggcgaccgtgatccccgtcatcgaagaagcgatgcgaaacgcg
cttcccatgtcggtcccaatcgtcgtcgaagtcggaatgggaaccaactggctggaagcg
cactaa
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