Roseimaritima multifibrata: FF011L_40360
Help
Entry
FF011L_40360 CDS
T07409
Symbol
cshA
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
rml
Roseimaritima multifibrata
Pathway
rml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FF011L_40360 (cshA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rml03019
]
FF011L_40360 (cshA)
03009 Ribosome biogenesis [BR:
rml03009
]
FF011L_40360 (cshA)
Enzymes [BR:
rml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FF011L_40360 (cshA)
Messenger RNA biogenesis [BR:
rml03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FF011L_40360 (cshA)
Ribosome biogenesis [BR:
rml03009
]
Prokaryotic type
rRNA helicases
FF011L_40360 (cshA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Beta-sol_PIC_HAP1_IgA0_2nd
Motif
Other DBs
NCBI-ProteinID:
QDS95243
UniProt:
A0A517MK43
LinkDB
All DBs
Position
complement(5191487..5192740)
Genome browser
AA seq
417 aa
AA seq
DB search
MDKPAGSQPTRFKDLDLSPVMHRALDRAGFTEATPIQAQLIPLAIDGLDVIGQARTGTGK
TAAFGIPILEQLDSLEECRDPQALIVVPTRELADQVGRELERLAFGVPTEICVLAGGKNM
NGQLRHLNNGVQVVVGTPGRVHDHIQRKTLRTDKIWCVVLDEADRMLDIGFRPQIERILR
CCPRDRQTLFLSATLTPTVRRLAESYMYKPDVIDCSENEMSVETIEQRYFTIAHDRKRSL
LVRLLKRENPAQAIVFCRTKRGTDKLQRALSREFEGVGCIHGDMQQRERDRVMQAVRDRK
LKVLVATDVVGRGIDVSTISHIVNYDIPQDCDDYVHRVGRTGRMGRDGLAFTFIVPGEGD
FLTSVEQRINKELIRDEMDDFEAVEAPPEPVAAAEVDPDQPKRKRLNPMNRKSRRRR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggacaagcctgcgggctctcagcccacgcggttcaaagacctcgatttatcacccgtt
atgcatcgggccttggaccgtgccggttttaccgaggccacgcccatccaagcccaactg
atccccttggccatcgatggcttagacgtgatcgggcaggcccgtaccgggaccggcaaa
accgctgcgtttggtattcctattctcgaacagcttgactccctagaggagtgtcgcgat
ccacaggccctaatcgtggttccgactcgcgagctggccgatcaggtcggccgtgagctc
gaacgcttggcgtttggtgtgcccacggaaatttgcgtcctggccggcggtaagaacatg
aatggccagctgcgtcacctaaataatggtgtccaggtggttgtcgggaccccaggtcga
gttcacgaccatatccaacgcaaaacactgcggaccgacaaaatttggtgcgtggtcctg
gatgaggccgatcggatgcttgatatcggcttccgtcctcaaattgaacggatcctccgt
tgctgtccacgcgatcggcagacgttgttcctttcggcgacgttgactccaacggttcgc
cgtttggccgaatcgtacatgtacaagccggacgtgatcgattgcagtgaaaacgaaatg
tcggtcgaaacgatcgaacagcgttatttcacgatcgcgcatgaccggaaacgcagtttg
cttgttcgtttgctgaaacgcgaaaatccagctcaggcgatcgttttctgtcgtaccaaa
cgtggcaccgataaattgcaacgtgccctcagccgagaatttgagggtgtcggctgtatc
catggcgacatgcagcaacgtgaacgcgaccgcgttatgcaggcggtacgcgatcggaaa
ttgaaagtcttggtcgcaaccgacgtcgtcggccgtggcatcgatgtcagcacgatctca
cacatcgttaactacgacatcccgcaagactgtgacgactacgttcaccgcgtaggacga
accggacgaatgggccgagacggcctagcgtttacgttcatcgtcccaggcgaaggcgat
ttcctgacctcggtcgaacagcggatcaacaaagagttgattcgcgatgaaatggacgat
ttcgaagcggtcgaagcgccgcccgaaccggttgccgctgccgaggtcgatcccgatcag
cctaagcggaaacgtctcaatccaatgaaccgcaaaagccgtcgtcgacgctaa
DBGET
integrated database retrieval system
