Roseimaritima multifibrata: FF011L_40450
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Entry
FF011L_40450 CDS
T07409
Symbol
pcrA_2
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rml
Roseimaritima multifibrata
Pathway
rml03420
Nucleotide excision repair
rml03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FF011L_40450 (pcrA_2)
03430 Mismatch repair
FF011L_40450 (pcrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rml03400
]
FF011L_40450 (pcrA_2)
Enzymes [BR:
rml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FF011L_40450 (pcrA_2)
DNA repair and recombination proteins [BR:
rml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FF011L_40450 (pcrA_2)
MMR (mismatch excision repair)
Other MMR factors
FF011L_40450 (pcrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
PcrA_UvrD_tudor
PLU-1
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QDS95252
UniProt:
A0A517MK35
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All DBs
Position
5204366..5206735
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AA seq
789 aa
AA seq
DB search
MDVARGKVVETNSQQLTAAQQEAVAHQDGPMLILAGPGSGKTRVVTHRIANLLQIGVPAH
QIAALTFTNKAAQEMGNRLATIAPGQDVWMGTFHRFCARLLRRYASMVGLAENYSIYDTS
DSKQAMKRAIAAAEVSTSHTSADQIAAVISRAKNRLVSPEMMQGQSLRHNEAVAARVYPV
YQKQLLLSNAVDFDDLLFHVANLLRENPELRSELDSRYRYIMVDEYQDTNLAQYAIVRSL
SVDYPNLAVTGDPDQSIYGWRGADINNILDFEKDYPHVKTVRLEKNYRSAPNILRIADQL
IKHNTRRKDKQLLTDREEGAPVVLRMYEDGYREADDIADQITAAIQNEGCRPQDFAVFCR
MNALTRSVEHAFRSRGLPYQIVNGVEFYQRKEIKDLLAYFHLVNNPAHDVALQRVINVPT
RGIGAKSIERLRDFADGNGLTLLDAARNSDQIEALPTRSATKIRQFVEMFDRLSLKATGS
LEELLLHLLEQTDYRAFLRKSSVDEQDNSPLANVDELLTAAVEFDRQFPEDGSLEAFLEQ
VALVSDTDAFDEENDRVTLMTMHAAKGLEFPRVFIIGVEDDLLPHYRSKEDPMQVEEERR
LLFVGITRAEERLQLSCCKRRALRGDLRPVVGSPFLMELPREEMRFIEPEDSNQFFDSGD
EFGDESFSVDGDAPEIWDQSNDSATTNEIDEVCQLPPDELPAKKAAKKPALIPAGLKTAA
NLLNEQSNDDKIPLNDFRNGMIVHHEEYGAGKVTAVSGRGPKRTATIEFSSGAARSFRLA
FAKLTLGEQ
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggatgtagcaagaggaaaagtggtggaaaccaatagccaacaactaaccgcggcccaa
caggaagcggtagcgcaccaagatggtccgatgctgatcctggcagggccgggaagtggt
aagacccgtgtggtcacccaccgcatcgccaatcttctgcaaattggcgttcccgcccat
caaatcgccgcgttgacgtttaccaacaaagcggctcaggaaatgggaaatcgactggcg
accatcgctccggggcaagacgtctggatgggaacgttccatcgattctgtgcccgcctg
cttcgccgttacgcatcgatggtcggattggccgagaattactcgatctacgataccagc
gacagcaaacaggcgatgaagcgtgccatcgccgcagcggaagtgtccacatcccacact
tccgcagatcaaattgcggcggtcatcagccgagcgaaaaatcggttggtcagccccgaa
atgatgcagggtcaatccttgcggcataacgaagcggtggcggctcgagtctatccggtc
taccaaaaacagctgctgctctccaatgcggtcgattttgatgacctgctattccatgtg
gcaaaccttttgcgagagaacccggaacttcgcagcgaactggattctcgctatcgatac
atcatggtcgacgagtaccaagacaccaacctggcccagtacgcaatcgttcgctcccta
tcggtcgactacccgaacctggctgtcaccggagaccccgaccaatcgatctacggatgg
cgtggggcggacatcaacaacattcttgattttgaaaaagactacccacacgtcaaaacg
gttcgtttagaaaagaactaccgaagcgcgccgaacatccttcggattgccgaccaatta
atcaagcacaatacccggcggaaggacaagcaactgctaaccgaccgggaagaaggggcc
ccggtggtcctgcggatgtacgaagacggctaccgggaagcggatgacattgccgaccaa
atcaccgccgccattcaaaacgaaggctgtcgcccacaagactttgccgtcttctgccgg
atgaatgcactaacccgctcggtcgaacatgcgtttcgctcgcgagggctaccctaccaa
atcgtcaatggcgtcgaattctaccagcggaaagagatcaaagacctgctggcttacttt
catttggtcaacaatccagcccacgatgtcgctttgcagcgagtcatcaacgtgccaacg
cgtgggatcggcgccaagtcgatcgaacgcctgcgcgactttgcagacggcaatggattg
accttgctggatgccgctcgaaacagcgatcaaattgaagcactgccgactcgctcggcg
acgaaaatccggcagtttgtcgaaatgtttgaccgccttagcttgaaagcgacggggtca
ctggaagaactgttgctgcatctgctggaacagaccgactatcgtgccttcctgcgaaaa
tcatcggtcgacgaacaagacaacagcccgctggccaatgtcgacgaactgctaacggcc
gccgtcgaattcgatcgtcaattccctgaggacggttcgctagaagctttcctggaacag
gttgccctggtgtcggacaccgacgcattcgatgaagaaaacgaccgcgtaaccctgatg
accatgcacgcggcaaagggtctggaattcccacgagtcttcatcatcggcgtcgaagat
gacctgctgccccattaccgcagcaaggaggatccgatgcaggtcgaagaggaacgtcga
ctgctgttcgtcgggatcacccgcgccgaggagcggcttcagctgagctgctgcaaacgg
cgggctcttcgcggagacctacgcccggttgtcggcagccccttcctgatggaattgccc
cgtgaagagatgcgtttcatcgaaccagaagactccaatcagttctttgattcaggcgac
gaatttggcgacgagagcttttccgtcgacggggacgccccagaaatctgggaccagtcc
aacgattctgccacgaccaatgaaatcgacgaggtctgccaattaccgcctgacgaactg
ccagcgaaaaaagcggcaaagaaacctgcgttgattcccgcaggattaaagacggccgca
aacctgctgaatgaacagagcaacgacgacaagataccgttaaacgattttcgcaatgga
atgattgtccatcacgaagaatacggtgcggggaaggttaccgccgtttccgggcggggc
cccaaacgaacggcaaccatcgaattctcttcaggtgccgcacgttcgtttcgattagcc
ttcgccaagctgacgcttggcgagcaataa
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