Roseimaritima multifibrata: FF011L_41270
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Entry
FF011L_41270 CDS
T07409
Symbol
lcfB_2
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rml
Roseimaritima multifibrata
Pathway
rml00061
Fatty acid biosynthesis
rml00071
Fatty acid degradation
rml01100
Metabolic pathways
rml01212
Fatty acid metabolism
rml02024
Quorum sensing
rml04146
Peroxisome
Module
rml_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rml00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FF011L_41270 (lcfB_2)
00071 Fatty acid degradation
FF011L_41270 (lcfB_2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FF011L_41270 (lcfB_2)
09145 Cellular community - prokaryotes
02024 Quorum sensing
FF011L_41270 (lcfB_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rml01004
]
FF011L_41270 (lcfB_2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rml04147
]
FF011L_41270 (lcfB_2)
Enzymes [BR:
rml01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FF011L_41270 (lcfB_2)
Lipid biosynthesis proteins [BR:
rml01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
FF011L_41270 (lcfB_2)
Exosome [BR:
rml04147
]
Exosomal proteins
Exosomal proteins of breast milk
FF011L_41270 (lcfB_2)
Exosomal proteins of breast cancer cells
FF011L_41270 (lcfB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QDS95333
UniProt:
A0A517MKC3
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All DBs
Position
5317108..5319012
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AA seq
634 aa
AA seq
DB search
MLDWYAFASGPLLGPNVQDCWKSADRVSPSRQGSNDRPRGSGSPLNPDTLACRTHHAPNR
VYSRPVWELLDRAASQVPAQIACRYNDQTWTYESLRTDVLRMTGMLERAGIGRGDRVALL
LPNIPEMLVAFHAIWRRGAIVVSVSPLMVQEEVRKFLNEVECRHVVALDLLAHLLPTPQQ
GLQQAWLVSLRERLPGYQQVGYFLSRLKRTRQWSPTGPAHADWLADSLCDCEPLAETPTF
NPNQTAAFILPTGGTTGSPKSVVLSHRNLVANAMQQAAHAGATMGEEKLMGVLPFFHSYG
LSAVVLGGAALGAELILHHRFNTSHVLDLIERQHPSVLHAVPAMLVAMNAQLRRHPRDIQ
SLKWVISGGASLEPEVAEEFAKHSGAVVVEGYGLSEASPVTHSGPLDGSGIAGTIGHPLQ
DTECQIVDRIDGHTNVLPGDVGELIVRGPQVMLGYWKDPAATTEAIRGDWLYTGDLACQD
AAGNYRIVERKKDLVITSGYNVFPREVEAVLRRDPQIADVAIIGIPDPERGEIVKAIVRT
VGDRRLNETSLQAFCKKHLAAHKRPRVFEQIQGELPKNFLGKIQRRKLRNQAPHDAPADA
AESEKTALETVDSPLTDQPSMTTSIRVPAPQETF
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgttggactggtacgcattcgcgtctgggcctcttcttggccccaacgtgcaggattgc
tggaagtctgccgaccgggtttctcctagccgccagggttccaatgacaggccgcgtggc
agcggttcgccgctgaatcccgatacgctggcgtgcaggacacaccacgctcccaatcgg
gtctattcgcgcccggtctgggaattgcttgaccgcgccgcgtcgcaggtccccgctcaa
atcgcctgccgctacaacgaccagacctggacctacgaatcgttgcgaacggacgtcctt
cggatgacggggatgctggagcgagcaggcatcggccgcggggaccgtgtcgctctgctc
ctgcccaacattcctgaaatgctggtcgcgtttcacgccatttggcgacgtggcgccatc
gtcgtttcggtcagcccgctgatggtgcaggaggaagtccgcaagttcctcaacgaagtc
gaatgccggcacgtggtcgctttggacttgttggcccatctgcttccgaccccacaacaa
ggtttgcaacaggcatggctggtgtcgcttcgagaacgcctgccagggtaccaacaggtg
ggctactttctctcgcggctaaaacggactcgacagtggagccccaccggtccggctcac
gcggactggctggctgattcactttgcgattgtgaaccgttggcagaaacgccgacgttc
aatcccaaccaaaccgctgcgtttattttgccgacaggcggaacgacgggatcgcccaag
tcggttgtcctcagccatcgcaatctggtcgcgaacgccatgcaacaggccgcccatgcc
ggagcgaccatgggggaagaaaaactgatgggcgtcctcccgtttttccacagctacgga
ctgtcggcggtcgtccttggcggagcggctttgggagccgaactgatcctgcaccatcgc
tttaacaccagccatgtccttgacctgatcgagcggcagcacccctcggtcctgcacgct
gttcccgcaatgctggtcgcaatgaatgcgcagctgcggcgacatcctcgcgatatccaa
tccctgaaatgggtcatcagtggcggggcctcgctggagcccgaggtcgctgaagaattt
gcaaagcacagcggcgcagtcgtcgtcgaagggtatggcctatcggaagcttccccggta
acccatagcggtccactggacggaagcggtatcgccggcacgatcggccatcctttacaa
gacaccgaatgccaaatcgtcgatcgaatcgacgggcataccaatgtccttcccggcgac
gtgggcgaactgatcgtacgtgggccgcaggtgatgcttggatactggaaagaccccgcg
gcgacgaccgaagcgatccgcggtgactggctgtataccggcgacctggcctgccaagat
gctgcgggaaattaccgtattgtggaacgcaaaaaagacctggtgatcacttcgggatac
aacgtctttccacgcgaagtcgaagcggtgctccgccgcgacccgcagattgcggacgtg
gccattatcggaatccccgatcccgagcgaggcgaaatcgtcaaagcgatcgtccgcacg
gtgggcgatcgacgcctgaacgaaacctctctgcaagcgttttgcaaaaagcatcttgcg
gcccacaaacgcccacgggtgttcgagcaaatccaaggcgagctaccgaaaaacttcctc
ggcaaaatccaacgtcgcaaactccgcaaccaggcccctcacgatgctccagcggatgct
gccgaaagcgagaaaaccgctttagaaacggtcgattctccgctcacagaccagccctcg
atgaccacctccatcagggtgcccgctccacaggagaccttctga
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