Roseimaritima multifibrata: FF011L_46120
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Entry
FF011L_46120 CDS
T07409
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rml
Roseimaritima multifibrata
Brite
KEGG Orthology (KO) [BR:
rml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rml03016
]
FF011L_46120 (truA)
Enzymes [BR:
rml01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
FF011L_46120 (truA)
Transfer RNA biogenesis [BR:
rml03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FF011L_46120 (truA)
Prokaryotic type
FF011L_46120 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
BON_like
Motif
Other DBs
NCBI-ProteinID:
QDS95811
UniProt:
A0A517MLQ5
LinkDB
All DBs
Position
complement(5935562..5936482)
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AA seq
306 aa
AA seq
DB search
MEISVVNLQEHDCLATLPGRTLHCNGLFAKNEYAPSHLLRVDQMLRSFKLGISYDGTGYA
GWQVQPRQLTVQGMLERAVAKLTGERVVVTGSGRTDSGVHALAQVGSLTTDAWRASAASL
MRAMNTKLPPDIVVVEAAEMPLYFHAIRDAVGKRYRYQVQVGGIRNAFEHRYRLHVPYRL
DVPAMRDAAGRLVGKLDFASFQAAGADRLTTVRDVRALDLIVEEGRGDAVYLDIEIEADG
FLYNMVRNIVGSLLEVGRGKQTPEWIDFLLDVKDRDKAGPTAPALGLFLIRVDYDIQPIL
DQGELP
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
ttggaaatttccgtcgtcaacttgcaggagcatgattgccttgcgaccttgcccggtcgg
acgctgcattgcaatggcctgtttgctaaaaatgaatacgcgccaagccatcttttacga
gtcgaccaaatgctgcgtagttttaagctggggatttcctatgatgggacggggtatgct
gggtggcaggttcagcctcggcagctgacggtgcaggggatgctggaacgggcggtggct
aagctgacgggcgaacgcgtggtggttaccggtagtggacggaccgattcgggtgtccat
gcgttggctcaggtcggcagccttaccaccgatgcttggcgggcttcggccgctagcctg
atgcgggcgatgaataccaaattgcctcccgatattgtggtcgtggaagctgccgaaatg
ccgctctattttcatgctatccgtgacgccgtcggtaaacgctatcgataccaagtgcag
gtgggcgggatccggaatgcttttgagcatcgctatcgcttgcacgtgccttaccgttta
gatgtgccggcaatgcgggatgcggctggacgcttggtcggtaagctggatttcgctagc
ttccaagcggccggggcggaccgcctaaccaccgtccgtgatgtccgtgcactcgacctg
atcgtggaagagggtaggggagacgcggtgtatctggatatcgaaatcgaagccgatggg
tttctttataatatggttcgcaatatcgtgggaagcctactggaggttgggcgtggtaaa
cagactccagaatggatcgatttcttgcttgatgtgaaagatcgcgataaggcaggccca
acggctccggcactggggctgttcttaatccgcgtcgactacgatattcaacccatcttg
gaccagggcgaattgccttag
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integrated database retrieval system
