Roseimaritima multifibrata: FF011L_49760
Help
Entry
FF011L_49760 CDS
T07409
Symbol
lgrD_3
Name
(GenBank) Linear gramicidin synthase subunit D
Organism
rml
Roseimaritima multifibrata
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Condensation
AMP-binding_C
PP-binding
T2SS-T3SS_pil_N
Motif
Other DBs
NCBI-ProteinID:
QDS96168
UniProt:
A0A517MMQ4
LinkDB
All DBs
Position
6420401..6423775
Genome browser
AA seq
1124 aa
AA seq
DB search
MTPVLSNLNSVAATVAFVPGTQPENRYATSQAQLEVWLSAKQSEQANCAYNEISTLELRG
PLDVDRLKQAIVKVCERHGSLRSTVGIDGQHILVHPRPQHAFSFVDWSIDPSKDIAAARR
MVVQNEATTPFDLVDGPLLRAVLQKATDTQHWLTLTAHHLVMDGWSLALFYRDLGYFYDT
LSGIQRDALAPASQYDEYALQMDQYMASDAGQADEAFWTKCYQGDIPVLELPIEKPRPSL
RTFTAERMETTLPATLVAAVQKVGAKSGCSRYNTLLAAFTAYVAQISGCDDFGIGIPTAG
QAALDHPELIGHCVNTMPLRTQVDSDTSFLSHMKQTRSRLLDAFEHQRYSYGTLLRKLAP
ARDPSRPPMLNVSFNIDPVMDTAQLGFTGFDLDITIEPRRFENFEWFINGVIRKDQSIEL
QVQYNSDLYTERAMECYFDGFRTFLEGVAASPDTRINDLPKVSLRMRQQAIVDWNATALD
YPIEATLHSEFSRQATATPDAVCVRFGDQTLTYADVDSQSNRIARYLKSEGVQEGDLVGI
CVNRSEQMLVNLIAILKAGCGYVPLDPAYPSDRLQYMCDHSQLTTIVTERSLVPRITSFN
KPHLAIDDAREAIANLDDSDVQTSANPNDTCYVIYTSGSTGKPKGVQVQHGAVVNFLYAM
REAPGFTQDDSILAVTTLSFDIAVLELYLPIVFGGSVVIADTDTSSNGSKLADALEKHDI
TWLQATPATWRLLIQSGWQGKTKRNGQAFKVQAFKVLCGGEPMPNDLVDPLLKRCDQLWN
MYGPTETTVWSAVYRITDASSPILIGKPIGNTQIYLLDQQGHEVSPGCEGEVYIGGAGVT
QGYLHRPDLTEERFVDNRYRNPFVAYNNNKLYRTGDLARYTFDGNLQFLRRNDKQVKVRG
YRIELGEIESHLKSHPAVAQCVVIVREDSPGDAKLVAYVIPKPEQSASAIELREHLRMSV
PNYMVPQNFVTLDSMPQTNNGKIDYASLPSPKQNTASDDLLNATAEKPETEAEKRLAAIW
QEVLETDQIGRDDNFFDIGGHSLLVMKVIAIVAETTSISLSPQDFLTGTLRHMAYQLEDV
TGAADTTADASVKVGMETVDPAKPSSSAEPKHRLLRSLKGFWNE
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgactcctgtgctttctaatttgaattccgtcgccgctaccgttgcgttcgttccgggc
actcaacccgaaaaccgttacgccacctcgcaggctcagctggaagtctggctgtcggct
aagcaaagcgaacaagccaattgcgcatacaatgaaattagcacgctcgaacttcgcggt
cctctagacgttgatcgattgaagcaagcgattgtcaaagtctgcgagcgtcatggatcg
ttgcggtcaaccgttggcatcgatggccaacacatcctggtccacccgcgtccccaacat
gccttttcgtttgtcgattggtcgatagatccatcaaaagatatcgctgcggctcgtcgc
atggtggtgcaaaacgaagcgaccacaccgtttgaccttgtcgatgggccgttgttaaga
gccgttttgcagaaagcgaccgatacacagcactggttaaccctcaccgcacaccacttg
gtgatggatggttggtcgctggcgttattctatcgcgacctcggatatttttacgacacg
ctgtcgggtatccagcgtgacgctttggcaccggcaagccagtacgacgaatatgcgttg
cagatggaccaatacatggcgtccgatgcagggcaagccgacgaagccttttggacaaaa
tgctaccaaggggacatccccgttctcgaattaccgattgaaaaacctcgtccttccttg
cgcacctttaccgcggaacggatggaaaccacccttcccgccacgttggtcgcagcggtt
caaaaagtcggcgcgaagtcgggatgcagccgatacaacaccctactggcagcgttcacc
gcgtatgtcgcccagatcagtggctgcgacgattttgggatcgggattccgaccgcaggt
caagccgcactggatcatcccgaactgatcggacactgcgtcaatacgatgcctctgcga
actcaggtcgattcggacacctcctttctctcgcatatgaaacagactcgcagcagactg
ctggatgcgtttgaacatcaacgttattcctacggaaccctgctgcggaaacttgccccg
gcacgcgatccgtcgcgtccaccgatgctgaacgtttccttcaacatcgatcctgtcatg
gatactgctcagcttggattcacaggattcgatctggacatcacgatcgaaccacgtcga
tttgaaaattttgaatggttcatcaacggagtcattcgaaaagaccaatcgatcgaactg
caagttcaatacaactcggacctgtataccgaacgagcgatggaatgttacttcgacgga
ttccggacattcctcgaaggagttgcagccagccccgacacccgaatcaacgacctgccg
aaagtcagtcttaggatgcggcagcaagcgatcgtcgactggaatgcaaccgcactcgat
tacccaatcgaagcgactctacacagtgaattctcacggcaagcaacagccactcccgac
gccgtttgtgtgcgatttggcgaccaaactttgacgtatgcagacgtcgattcgcaatcc
aatcgaatcgcccgttacctgaagtcggaaggcgttcaagagggcgatcttgttggcatc
tgcgtcaaccgcagcgagcagatgttggtcaacctaatcgcgattttgaaagcgggatgt
ggctacgtcccacttgacccagcctacccgtcggaccgattgcaatacatgtgcgatcat
tcccaactgacgacgatcgtaactgaacgcagcttggtaccgcgaatcacttcgttcaac
aaaccccaccttgctatcgatgatgcaagggaagcgattgcaaacctggacgattcggat
gtacaaacatcggcaaatcccaatgacacctgctatgtgatctacacatccggttcgacg
ggcaaaccaaaaggggtccaagtccaacacggtgcggtagtgaatttcttgtatgcgatg
cgcgaagcccccggttttacgcaggacgattcgatccttgctgtgaccaccctatcgttt
gatattgcggtgctggaactgtacctgccgatcgtctttggtggatcggtagtgattgcc
gacacggacacatccagcaatggatccaaactggccgacgcccttgaaaaacatgacatc
acatggcttcaagcgacccctgcgacgtggcgtttgttgattcaaagcggatggcagggc
aaaaccaaacggaatgggcaggcattcaaggtgcaggcattcaaggtactgtgcggcggt
gaaccaatgccgaatgacttggtcgatccgctgctgaaacggtgcgaccagctttggaac
atgtatggtccgaccgagacgaccgtctggtcggccgtctacagaatcaccgatgcttcg
tcgcccatcttgatcggaaaaccgatcggaaacactcaaatctatttactggaccaacag
ggccacgaagtctctcccggatgtgaaggcgaagtctacatcggtggtgcaggcgtcacc
caggggtatctccaccgtcccgatttaaccgaagaacgttttgtcgacaatcgatatcgc
aatcccttcgtcgcctacaacaacaataaactctaccggaccggtgacctggctcggtac
acgtttgatggcaacttgcaattcctacgtcgcaacgacaaacaggtgaaggtccgcgga
tatcggattgaactgggtgaaattgaatcccatttgaaatcgcatccagcagtcgcccag
tgcgtcgtgatcgttcgcgaagattcacccggcgacgcgaaactggttgcctatgtgatt
cccaaaccggaacaatcggcatctgcaatcgaacttcgcgaacatcttcggatgtcggtc
cccaactatatggtgccgcaaaacttcgtcacgcttgatagcatgccgcaaaccaacaat
gggaaaatcgactacgcgtctctgcccagcccgaaacagaacacggcgtctgacgatctg
ctcaacgcgaccgccgaaaaacctgaaaccgaagccgaaaagcgacttgccgcgatttgg
caggaggttttggaaaccgatcaaatcggtcgagacgacaacttcttcgacattggaggt
cactcgctgttggtgatgaaagtcatcgccatcgttgcggaaaccacatcgatctcctta
agcccacaagacttcctgaccggaacgttgcggcacatggcttaccaattggaggatgtg
accggtgcggcggacacgactgcggacgcttccgtaaaggtcggaatggaaacggtcgat
cctgccaagccctcaagttccgcggaacccaaacatcgattgctgcgatcccttaaagga
ttttggaacgaataa
DBGET
integrated database retrieval system
